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13-5545-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1431710 [Map]; Strand: c
      • AT1G05010.1 - [+] show detail - ethylene-forming enzyme
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 13-5545-1 - 5-prime edge 
    TNTANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCNAN NGTGGANCAT ATAGTGCNAT NTCAGACAGA 
    CGGAGAANGA ANAATGTCGA TCGNCTCATT ATGTAAANCC NGGAATCCAN 
    CTGATGCATA TGNTCACCGG CAGCCANGAG CGTGATATNN ANNNGANGCA 
    GANCANGGAG ACCAATNTAG AACNTATCAC GANATNTGNG GGTGAAGATN 
    ACATGANACT CTACTCTGAT GTCAAGTTTC AGGCCNAGGA ACCAAGGTTT 
    GAAGCCATGA AAGCTATGGA GACAACNGTG GCCAACAATG TNGGACCGTT 
    TNANCGGGAN C

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1431743 [Map]; Strand: c
      • AT1G05010.1 - [+] show detail - ethylene-forming enzyme
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 13-5545-1 - 3-prime edge 
    NCCAAATGAA ACCGTACTTC CCTTGGTTAT CACCTGGTTT AATCAATCCA 
    AAATTAAAAC TCAAAATTCT TATTTCAATT TGGTTCGGTT TNGTACGGTT 
    TGGTTCAGTA GTTACCTCAA GTTGATCGCC GAGATTAACG ACGATTGAAT 
    GCTTAACCGG AGGAACATCG ACCCACTCGC CGTCTTTAAG AAGCTGAAGT 
    CCACTGACTT TGTCGTCTTG GAAGAGGAGG ATGATGCCGC CGGCGTCGGT 
    GTGGGCTCGG AGACCCTTGA CTAGGTCCGG ATTAGGACAA GGTGGATAAT 
    TGCTGACTTT GGTTCCAAAA GTCGGTCTTT TCGACCCGTA AAACACCTTC 
    TTCAGATAAC CCTTCTCTAA ACCGAGATTC TCGCACAGCA GATCCAGTAG 
    CTCCTCCGAC AACTTCTCTA TCTTTCCGGC GAACTCTTTC ATTAACGTTC 
    TGTAGAAAGA CAATAACACC GGTTAAACTT TTACTTAAAC CCAAAAGAAA 
    AAAACCGGTT CATGCTGAGT TGTTTTGAAA ACCANTAAAT CTGANATCCT 
    GTAACCGGTT AAGGTAAAAA ACGGACCGGT NTGAAACTAA AAAAGGTTAC 
    CTGTATCNNC NNCNANATCA GGGACNTCNG CNATNTTNNA NACNGGAANG 
    NGCTNNNNGN NNAANNGGNT NNC

AT1G05010.1

Model type
Protein coding
Short Description
ethylene-forming enzyme
Curator Summary
Encodes 1-aminocyclopropane-1-carboxylate oxidase
Computational Description
ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink).
Link
InterPro Scan - TAIR