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13-5547-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5608988 [Map]; Strand: c
      • AT1G16410.1 - [+] show detail - cytochrome p450 79f1
        Distance: 0; Region: exon1 (CDS)
      • AT1G16410.2 - [+] show detail - cytochrome p450 79f1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5547-1 - 5-prime edge 
    AGGACGAGTC ATGAATAGTT CGGGTAGATT GCCGAGGATG GGCCATCCTG 
    GTGGGCCAGG AGGAAGCTGG CGAGATCGGT CTTTGGTTTT GGTGGGCCTT 
    GAGAGTATTC GACCCAGTAG AGTGATTGAT GCCATGGAGA GGATAAAGAC 
    TAGTAGGATG TGAAAAGGGT ATGGTAATGA TGTGGTAAAG CTCATCATGA 
    TGTATGTATG CGTGTAGTGA GGTGTGCATT TGTTAGAAAT GAACACTAGC 
    GATATCTGGA AAGTGTTTGT TGTGTGGATT ATTTATAGAA TCGATATCAT 
    GCATGTGATG CTCACGTAGG GTTTGGGCTT TTGGGTAGGT ACTACGGTAA 
    TCACGTTTAT ATATATTTTA TATCTAGTTT GATGAGTAGC GATAGTAAAA 
    GCTCTATAGA TTTTTTAATG TCTACTACGT CTATACTTCT ATTTCAAGGG 
    ATTTANTTTT GTCNCAAAAA CAGNNNGNTT TGNATTTTGA ATGTAAACGT 
    GTTTTANCCG TNNNAAAAAA GANANNNNAN TNTNNNAANN NAANNATCCN 
    TANNAAATAT NTTGAATTNN NAAAATAANT NNATCCNTNT ANNNNCTTNN 
    ANNNNTNTTT GNTNNTNNNN NNNNTNNTNT TANNANCTNA CACTTAATNN 
    AAATNTNTN

AT1G16410.1

Model type
Protein coding
Short Description
cytochrome p450 79f1
Curator Summary
member of CYP79F
Computational Description
cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 27252 Blast hits to 27093 proteins in 1494 species: Archae - 44; Bacteria - 2170; Metazoa - 10673; Fungi - 5027; Plants - 8510; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G16410.2

Model type
Protein coding
Short Description
cytochrome p450 79f1
Curator Summary
member of CYP79F
Computational Description
cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR