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13-5619-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13337099 [Map]; Strand: c
      • AT2G31271.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -4708; Region: intergenic
      • AT2G31280.1 - [+] show detail - conserved peptide upstream open reading frame 7
        Distance: -1988; Region: intergenic
    Flanking Genome Sequence: 13-5619-1 - 5-prime edge 
    CCTACCTGCG GTATACTGCA GATTAATCTC TAGATTATAG GACTTATTGA 
    ATCTAAAGAC GGGTCATCAA AGATTTCTTA AACTGAAGCA AAATATATTG 
    AATATTCAAA TATCTATATG TTACCAACGT TATAAACAAA TAAGTCAATT 
    TAATATTTTA TATATGAAAT CAATTAAATC TTAATCACAT AAAAATTAGC 
    ACAAAAAAAA AGTNTTCAAC AATTAAAAAA TTATCAAATC TCTGNGTTAT 
    ATAAGTTTTG ATACTATATT TGAATAAAGN GTAATATACC TTTTTAATTN 
    GNATTCTTTA ACTAATTTAA GCTAACTAAT ATATTGGCTA ATCTTATATC 
    TATCAAAACC GACTATCGTT TCTTATCTCT ATAGNATTTT NGCAANAATG 
    TTTTGGNGGA TTTGGATAAA AATGCATTCA GGTCATATGG TACATTCCCC 
    TATTAAATAA ATATGGNGCA CTCTTATTTT ATTAGCTAAA ANGTTTAGAT 
    TATAATTCAN AGTCAACATG GAGGGACGGG TTTTTGAATC AACATTANTA 
    AAAANGTAAA ATATAATTAA TCCACCTTTN CAATATGGGT TAAATCTTTA 
    ATTNATTATT TNTNANGACC ACTAATNTTA AACATATCAA ATCATCCTAN 
    TTTANAAAAA ATTNTNTAAA NCCN

AT2G31271.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G31280.1

Model type
Protein coding
Short Description
conserved peptide upstream open reading frame 7
Computational Description
conserved peptide upstream open reading frame 7 (CPUORF7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G06150.2); Has 440 Blast hits to 368 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 436; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR