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13-5692-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7465205 [Map]; Strand: c
      • AT3G21260.1 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: -300; Region: promoter
      • AT3G21260.2 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: -111; Region: promoter
      • AT3G21260.3 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-5692-1 - 5-prime edge 
    ATCATTTTCA ATGCTCGTAA GCTCTTGCGT AACCCACTTT AGATATATAC 
    TCCCTAAATA CTAAATTACT AAGTATATTT TTATTAAGAA AACAAAGAAT 
    GCTACATTTT TTTTTTTTNN TNNGGGCCCA AAAAAAAAAA ANGGGNTTTT 
    TTNGNCNNCC NTTNTNTNNT TNGGGGGGNC CCCNAAAAAA GGGGNGGGNT 
    NNNTTGGNNN NCNGNATNAA AANNAAACCN GGGGGGGGNN CCNGNCCCCN 
    ANNTTNTTTT NAANCCNGGN ANCCCNNGGA NCCCTTNNCG GGGNTTTNGG 
    GGGNNTTTNN GTNNNCCCNN NNNNNNNAAN GNNGGGGCCC CNNTTTTTNN 
    NCCCCCCCNN TTTTTTTTTT TNANTTTNNN CCCCCGGGGG GCCCTTTTTT 
    TTTNNNGGAT TTNGGGGGGG GGGGTTNGGT AAAANCGGNN NNGTTNGGNG 
    GGGTNAAAAA ANTGGGGGGA ANGGGACCCN TNGGGGGCCC AAANTNGGGG 
    GGGGAANCCG GAAAAAAAAA CCCGGGGGGG GGNCCCCNNN CGGGGNGGGG 
    GNCCNGCGGG GCCCNTTNA

AT3G21260.1

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Computational Description
GLYCOLIPID TRANSFER PROTEIN 3 (GLTP3); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 413 Blast hits to 413 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 95; Plants - 108; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G21260.2

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Computational Description
GLYCOLIPID TRANSFER PROTEIN 3 (GLTP3); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 426 Blast hits to 426 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 95; Plants - 108; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G21260.3

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Computational Description
Glycolipid transfer protein (GLTP) family protein; FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: glycolipid transfer protein 2 (TAIR:AT1G21360.1); Has 501 Blast hits to 501 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 110; Plants - 118; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link
InterPro Scan - TAIR