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13-5704-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11530903 [Map]; Strand: w
      • AT1G32050.1 - [+] show detail - SCAMP family protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: 13-5704-1 - 5-prime edge 
    GTTCTTCAGG TAAGCCTCTG ATCATACTTT TCATGGCTTC TTCAAAAACT 
    GTTGACGTTG ATGAACTAGT TAACATTTGA TTGATCTGGT TTCCCATTTT 
    GGCTTTGCAG AAAATTTACC TCTACTTTAG GGGAAACAAG TGAAAAGGAG 
    ATAAGAAAGG AAGATGATGG TAATTTCCCT TACGATAAGA AAAGGTTTGA 
    AATATGTGTA TCTCCTATGA ATGTAATTAC CATTTTACCG TTTGATGCGT 
    TGTGTTGATT GAGGTATATT CTTTAGTTAC TATAGTAGCA AGAGAGAGTG 
    GTTGTTCGGC CATTTCTTTA GGTTTTTTAC TCTGTTCTTC TCTGGTCTGT 
    AATATACCAA TATCGTCTCT GAGCGTTTGG GATTTTTTTT CGGCGAAGTG 
    GATGGACTAT TAAGACAAAA AAAATCATAG CCATGAATTA TTACTAGCGA 
    CTCACTTCGG TCTGAATCTT AAAATCTGGT CCTTCTCATT ATCATTGCGT 
    ATAACAAAGT AGATGTTTCG ATATGGCCAT GAACTTTATG ATTATTATTT 
    TTGCAAACAC CAANAAGCAA AACTCAAAAG AGATTAAAGT AATTTTTTTG 
    GAAAGATTTA ATGGGAGTCC ATAGTTTTTA CTTTTTTAAC CTAACAAATT 
    CTNTTATTTT GGGTTATGAG TTTCATGCCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11530787 [Map]; Strand: w
      • AT1G32050.1 - [+] show detail - SCAMP family protein
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: 13-5704-1 - 3-prime edge 
    TGAAGAACCC ATAGACTCAG CAGTGACTCC AAGCAGAAGA GACCGAACCC 
    GATAAAGTAG AAGATCTGCA ATCATTCATT AGGGTCAGAC ACTTTGAGAT 
    ATATTATAGG CGTCTTCATG AAATGTACAA TAGATGTATA GCTCATACCC 
    CGGCTAATAA ACTGTCTGAG ATGACATCAA TTGCTGCAAG CACACCCCTG 
    TTGATCGAAA TAAGAGAAAG GTTTTTTAAG TTAATCTCAA GGCAACAAAA 
    CATACAGAGG TGAATCACAG CTAGATTCTC ACTTCTATTG GTAGTCATAA 
    TTCTCATTAT TTAGTAACAA CTCAATATTA ATAAACCTAT CAGAACAATT 
    TAGAACTTTC CAACTGAAGC CCTCACCAGA CTAACCAACT ACATATGAAG 
    TAAGAGTACA CTCAAACGCA AGTAGAATCG TAGGCTAATA TTGGAAGACT 
    TACGTTAATG ATTTTCCATG GAAAAAGATT GGAGGGGCGA TGGCAGCAAC 
    GATGCAGAAG CCAATGTGAA TCTGTAAGGA GCTCAGGTCA ATCATGTGGA 
    AAATGGAAGT ATATCTACTT AAAGGTAAAG ATATAAAATA GGGTTTTATG 
    AACTCACCAA NTNAGGTGAA AGAAAAACCA ACCANACTTC AAAGCACTGT 
    CCAGTCCTGC AAGGCCGTAA AATGTATTTT AATTTTATCG CCCCGGTAAT 
    NGTANT

AT1G32050.1

Model type
Protein coding
Short Description
SCAMP family protein
Computational Description
SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR