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Mutant Lines
13-5741-1

13-5741-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 5220725 [Map]; Strand: c
- AT1G15165.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
  Distance: -612; Region: promoter
- AT1G15170.1 - [+] show detail - MATE efflux family protein
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TGGCTGCCGG TAGAGAGAGT CGAGAACGTG ACATGGAGCG ATCTGCGAGA 
TGGTTCATTC ACCGTAGAAC TCAAAAGGCT TATCTTCTTC GCCGCTCCTA 
TGGCTGCTGT TGTTATCGCT CAGTTCATGT TACAAATCGT TTCAATGATG 
ATGGTTGGTC ACCTCGGCAA TCTCTCCCTC GCTAGCGCCT CTCTCGCCTC 
CTCCTTCTGC AACGTCACTG GCTTCAGCTT CATCGTCTGT TTTCTCTTCC 
TTCTTTCCCC TAAATTGATA CACTTATCTC TGTTATTTTG ATGATTGTTA 
CTTTTTGCCT GTGGTGTTAG ATAGGATTGT CATGTGCCTT AGATACTTTG 
AGTGGTCAAG CT

AT1G15165.1

Model type: Protein coding
Short Description: RING/FYVE/PHD zinc finger superfamily protein
Computational Description: RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 427 Blast hits to 408 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G15170.1

Model type: Protein coding
Short Description: MATE efflux family protein
Computational Description: MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15180.1); Has 8903 Blast hits to 8835 proteins in 2013 species: Archae - 124; Bacteria - 6072; Metazoa - 149; Fungi - 330; Plants - 1330; Viruses - 0; Other Eukaryotes - 898 (source: NCBI BLink).
Link: InterPro Scan - TAIR