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13-5754-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19290601 [Map]; Strand: w
      • AT3G51990.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 1271; Region: intergenic
      • AT3G52000.1 - [+] show detail - serine carboxypeptidase-like 36
        Distance: -2409; Region: intergenic
    Flanking Genome Sequence: 13-5754-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA AATCAAACCT AGTAATTCTA CTCCTCTTGT 
    GATCTGGTTT AACGGAGGTA CCTATAGAAA ATATATATAC CCTGTACAAA 
    ACTCCTTTAC TTGGAACTAG TTATATATTT TTATTTTTTT ACATCTAATT 
    AGACTCTTCA AAAACTTGAA AAGATAAGTC TTCTATTAAT ATCTAGTTTT 
    TGAGGATGTA TAATTTCCTA TAATCGTTGA GAATTATACA AGAACAAACT 
    TTTTATAAAA CAAATACAGG ACCGGGGTGC TCATCTGTAG GACTTGGGGC 
    ATTTCAAGAG CTTGGTCCAT TCCGCGTACA TAGCGACGGC AAAACGCTTT 
    TCCGCAATCC TTATTCATGG AACAACGGTA CATGATTGAT TGTTTACTAT 
    CAGTTTCTGC TTCTTTTGAT GATTGATTGA GAAGATCACC AG

AT3G51990.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G28390.2); Has 110531 Blast hits to 109509 proteins in 4468 species: Archae - 125; Bacteria - 12250; Metazoa - 41494; Fungi - 9129; Plants - 31227; Viruses - 433; Other Eukaryotes - 15873 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G52000.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 36
Computational Description
serine carboxypeptidase-like 36 (scpl36); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 37 (TAIR:AT3G52010.1); Has 4030 Blast hits to 3970 proteins in 473 species: Archae - 0; Bacteria - 582; Metazoa - 647; Fungi - 872; Plants - 1453; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink).
Link
InterPro Scan - TAIR