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13-5783-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729307 [Map]; Strand: w
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-5783-1 - 5-prime edge 
    AGTAGAGGCA AACAAGGTTA GTTGTTTGAA ATTGGTATGG AGGATACTAT 
    CCAAATCAGA GTCTTTGTGG GTTACTTGGA TATGGAAATA TCTCATACGA 
    AAAGGGTCAT TCTGGTTGGT TAAAGAGAGC TCCAATATGG GTTCTTGGAT 
    GTGGAAAAAG CTATTCAAAT ATAGAGATTG TGCCAAGACT ATGCACAAGG 
    TGGAAATTAA GAGTGGCAGC TCAACCTCTT TTTGGTTTGA TAATTGGTCA 
    CAGTTGGGCA GATTGATCGA TATAACAGGT CCTCGTGGAG TCATTGATTT 
    GGGTATTCCT CTCGATGCAA TGGTTGAAAC AGCTCTACAT CCTCGACGGC 
    GTCGAAAGCA TCGAGTTGAC GTTCTCAACA GAATTGAAGC TGAGATACAT 
    ACTACTCGCC AACGGATCAG AATAAATGAG AAGGACATCT CGATGTGGAG 
    ATTTGTGGGA GATAAGTTTA AGACAACTTT CTCAACAAAG TTCACTTGGA 
    ATAATATTAG AGGCACACAT CCAACAGTGG TTTGGTCGAA AGGTGTATGG 
    TTCTCTTACT CTACGCCCAA ATACTCATTC TTAACGTGGC TTCCAATTCA 
    TAATAAATTA GCAACAGGGG ATCGAATCAA GAAGTGGAAT ACGGGGCAGC 
    ATGTACACTG TGTCTTATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729191 [Map]; Strand: w
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-5783-1 - 3-prime edge 
    CCTCTACTAG TGATTTAATT CCCAGCCCTC CCTCATTTAT TGGCTTACAA 
    ATCTCGGTCC AAGCAATCTT AGCTCTGTTG GGATTAAGAT CCGGTCCAGA 
    CCACAGAAAA GCCGCACAAA TCTTCTCAAT TTCCTTTAAA CAACNTGTTT 
    GGTAATCGAT AAGCAGATAT CCAGAAGTTG GTGATACTTA CAAGTACTGA 
    TTTGATGAGA GTAAGGCGGC CTGCGTACGA TAGTGCTCTT GCAGTCCATG 
    AGCTGATTTT TGATCTAACC TTTTCTTTTT ATTATTCTTC TTATCTTTCT 
    TCTCTTTCTC TTTCTTTGTG TTGATGATGC AATCACCACT CGATTCTCTG 
    CCTCCTCCAT CAATAATAGT ATTGCCTCTA TCTCTCTCTC TGCTGAGCAA 
    ATATTTATAT CTCAAAGGGA TAAAAGGAAC AAAATCAAGC ATTTAAGGGG 
    GTGTATTCAA TCTTATATTT TGAGTGATTT GAGGTAAATT GAGTTTTTCT 
    ATGTTTTTAT GATTTTGGGT GGATTTAAGG AAACCATTCA AAACCACAAT 
    GCCACCTAAA GCCATAAGAT TTAAAAATCT CTTACAATCA TTATAAATCT 
    AATCCTTAAG TTTTCAAGGA CATGAAAATT TTGAGTANAT TTTNAAGCTA 
    CCANNCNGGG CCGNNNACCA CCGGNCCCNT NNAN

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR