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Mutant Lines
13-5816-1

13-5816-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 346929 [Map]; Strand: w
- AT1G02000.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 2
  Distance: 0; Region: exon1 (CDS)
- AT1G02010.1 - [+] show detail - secretory 1A
  Distance: -962; Region: promoter

NGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTC AAAGGGAAAG CTATTTCGAT CTTCGAAGGA 
GCCAATCACG GAACAGTGGC TAGGGATTTC ACATACATCG ATGACATAGT 
GAAAGGATGT TTGGGGGCTC TGGACACGGC GGAGAAGAGC ACAGGGAGTG 
GTGGCAAGAA GCNGGGGAGC GGCTCAGCTA AGGGTATTCA ACCTGGGGAA 
CACATCTCCG GTGCCGGTGA CTGAATNCTT TGTGAGTATA TTGGAGAGAT 
TGTTGAAAGT GAAAGCCAAG AGGAACATGA TGAAGCTGCC GAGGAATGGT 
GATGTGCCCT TCACACATGC TAATATCAGT TCGGCACAGA GAGAGTTTGG 
GTACAAACCA AGCACGGATT TGCAGACTGG TCTAAAGAAG TTTGTGAGAT 
GGTATCTTGG TTACTACAAG CAGGGGGGAA AAAAAAGTTG CTGCTGCTGC 
TTGAATATTG ATTATTNNAC AAAATTCTTT ATGTNTANTG AGTGAGTGGG 
NTTGATNCNC CCCNTNAAGA AAAAAACNTG ANTCCTTTCN ANATTATNNT 
ATTTCTTTAA ANTTTNGGAT TTCNGCCTTT NGAAAATTNC NAANNCCNTT 
TGNGNTCNAA ATNNNNNGAA NTTTTNTNTT CCANAGNNAN NNCCANTTTA 
TTCTCTNNNT TTTTTNCNCC CNTGGGGGCC CNNNAGANNN NNNGAANTTG 
NGNNNTTTCC CN

3 prime edge [+] show sequence

Chromosome: 1; Position: 346912 [Map]; Strand: w
- AT1G02000.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 2
  Distance: 0; Region: exon1 (CDS)
- AT1G02010.1 - [+] show detail - secretory 1A
  Distance: -979; Region: promoter

ATGAAAACGG TAGAGGTATT TTATACTCAA AGGCTTTGAG GATGTCTCTG 
GTGAAGAAGA AGTAAGCCAT GTCAGGTCTT CCCCACGGCC CGTACACCGT 
GAAAAACCTC AAGCCGGTGA GAGAGAGCCC GTAGATGTGG TTGTAAGTGT 
GGGCAATCTC TTCTCCAGCT TTCTTGGTCG CAGCGTAGAG ACTCGCAGGC 
TGATCTGTTC TGTCTTTCTC AGAGAAGGGG ACTTTGGTGT TTAAACCGTA 
GACGGAGCTA GACGATGCCC ACACGATCGC CGGCTGAGGA TTAGCGGATT 
TACAGACCTC GAGGAGGTTA ACGAAACCAG CGATGTTGCT GTGAACGTAG 
GAGCCGGGGT TCTCCATGGC GTATCTGACA CCAGCTTGAG CGGCAAGATG 
CATGACGTGA GTGAAAGGGA CGACCTCGAA GAGCTTCTTG AGGAGAGACA 
GATCGTTGAT GTCTCCTTCA ACGATGAACA CTCCGCTTCT CTCGAGGAGG 
GCTTGTCGAG ATCTCTTGAG AGAGGTGTCG TAGTAATCGT TGAAGTTTGT 
CGAGGCCTAN AACGCCGTCG CCGCGTCGTT TAAGAGCNGC AGAGACTTNA 
AGTCCCGACN AAAACCNGGC GGCCCCCGGT TGACNAAAAA CNGANACGCC 
CGTTGNGGGT TGCGGNNCAC GAACCGGGGG GATNGGACGC GNTTTCTCCC 
NAGCGGGACC GNCCCNAANA NTGGGGGCNA ANAAAANCGG GCGANAAGGA 
ATCTGGNATT GGGAAAGGGN GNNNNGGTNA AANAAAA

AT1G02000.1

Model type: Protein coding
Short Description: UDP-D-glucuronate 4-epimerase 2
Curator Summary: UDP-D-glucuronate 4-epimerase
Computational Description: UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02010.1

Model type: Protein coding
Short Description: secretory 1A
Curator Summary: member of KEULE Gene Family
Computational Description: secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 1717 Blast hits to 1698 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 705; Fungi - 477; Plants - 219; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink).
Link: InterPro Scan - TAIR