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13-5826-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 285002 [Map]; Strand: c
      • AT4G00695.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon5 (3UTR)
      • AT4G00695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 13-5826-1 - 5-prime edge 
    CACTCGTTAG ATATTTTTGA GTGTATGAGT AACATACTCA TGAATAGCAA 
    AAAGAAGAAG AGATGTTCGC TAACAAGCAA AGATGTTAAA ACCCTCTCCG 
    AAAAAAAAAA ACCAANNNNG CTTAAANCNN NCANTANTTT NGGNGGGGNN 
    NAAAANNANT NNNCGGACCC NNNNCCANGG NANGTACCNT CCNTNGNTTT 
    NCCANCNNCC TTNGTTGGGA AAANCNGNGG NCNAANGGTT TGGCANCCCT 
    TTNTNNNNGT NNNTNGNCCN TCGNANCNGG NGGGTTCCTN CNGGNTCNTT 
    NAANCCCNAA AAAAAGNCTT NTANGTTTTG GGCNGGGAAN TTTTTCCAAG 
    GGGCCTNCCC CNAACTTTTT AAACTTTNTC CCAANCNNAN CCTTTNCNGG 
    GNTTTTTTTT TNGACTTTTG GGGGCANANT TCNGGNCAAA ANNCCCNNCA 
    GGGTNNGNNG ANTNNTNNCC ANGCGTTTNC AANANGGTTA NANCNTTCCA 
    AAAGGNGGGA GTTTTGGGGN NAANCCTTGG GGNNAANGAA ANGNNACCAN 
    NNNTNTNCCT TTTTTTNTTA NAAACCCCAT TANCNCAANC CCCCGGAANA 
    AACCANTTTG NNTGGGGTCC CAAAANAAAA AAAGAANTAG CTTNCNCATA 
    NCCCNNATTG TCGGGGNTTA AAAAAAAAAA AAANGGGNNG GGNGTTNNAA 
    AAAANCCCNN ANNANNCGGN CC

AT4G00695.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3).
Link
InterPro Scan - TAIR