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13-5827-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23835593 [Map]; Strand: w
      • AT1G64235.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -656; Region: promoter
    Flanking Genome Sequence: 13-5827-1 - 5-prime edge 
    GNGNAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CCTAAGATGA TACGTTGAGC GATCTTTGAC ACTTTCTTTT 
    CTTCAGTTTT TCTACTATAA TAAGTAATAG CCAATATGGA GAAGTGGTCT 
    TCTAGTGTTT ACTGGTTAGG AACATTTTCT CCACCTTTAT CATTTCCTTG 
    CTTGTAAGGG ATCAACGATT CCATATGTGT ATTAAATTAA AAATACCTCA 
    AATCAAAGAA TAAAGGTACA CTTTATCTAC CATTGAATTA AGTTACCTCA 
    TTATGAAATG GAAAGCGAAA TCAAAAGGCA TATTATTACG AAACAATAAA 
    CTGTAGATTT ATTGGTTAGC TAGATCATCC AACTTTTCAT TCAATCTGAA 
    TTTTCATTTA ATTTATGATG ATTTGAATGT AAAATCTGTA AATGATGGTG 
    TATTATTATT AACCAATGAA ATATTCTAAA TACTGAAAAT AATTCATGTA 
    GTGATTTAGC CAATCATTTA GGCTATATTT AGTTATTTAC ATAGCAACTA 
    ATTACGTTCA TGTTGATTAA CAAGGAAAAA CGCGTTCATT ACGCAATACC 
    ATGCAATTGG AATCCTTCAT TATCCAAGAA ATACCTAAAC AAATTCTCAT 
    GTTTTGCACA GAAACAAAAG GAATCCAAAA TATTTGCTAT AGATATATCT 
    AAAGAAACAA CTATNTATAC ATGCATGAAG ACCGCGGATT GNTGGCTTAT 
    TACATNNGGC ATTTCTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23835964 [Map]; Strand: w
      • AT1G64235.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -285; Region: promoter
    Flanking Genome Sequence: 13-5827-1 - 3-prime edge 
    GGTGACACCG CGGTCTTTAA TCGCATCACA CAGACATGAT CTTTGCTCTT 
    TCATTCTCTC ACAACATGAA GCCGGCAGCT TCATTCCACG AGCAATACCG 
    TCGAATCAAA GACCAAGCGC CATTGATTTT TGCGGGGTTG TAACACATTG 
    TTCTCCATCC CTCTTGGAAC TACTGCTGCT CGAACAGTTA GCTTTTGTCT 
    GAGGAGGAAA TGATACCAAG AGTATGACGA ATGAGATAAG CAACAATGCT 
    ACAATCTTCA TATATAGTAG TTTGTTTAGA TACTAGGCAA TCTTTAGGGG 
    TTGACACTTT CTTTCTGTCA AGGAATCCTC TACAGCAAAT TGTTAGGATC 
    TGATTCCTAT TATTTTCATA CAAGGGCAAA TTTCGAATCA ACATCTTCAA 
    AATCAAGCAA TTTTTATTAT ATTTTTCTGC GAAAGTGCTT TTATTTCAAT 
    ATTTTCTCAA ACACCAAATT TTTTTTTTTT TTTTTTNGGG GGGGGGGCCC 
    CNNTTAAANA GNTTTTTTAT ATTTNAAAAA ANAGTTTNGN NGGGGGNAAN 
    ANGNCAGANT NNCNCCNTNN AANAAANAAA GTNNGNTTNT AAAAATTNTG 
    GNNNANCGCN NNNAANAAAN AANTNGGGNA ACNTTNGGGG NTTTNNAAGN 
    NANNGAAGNG ANAATTTNTT TTTNNAAAAN AAANAAGGTG TNTTAACCAA 
    ANAGGNGANN NANCNNGGGG NGNNNGGTN

AT1G64235.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G57310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR