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13-5832-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3394817 [Map]; Strand: w
      • AT1G10350.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5832-1 - 5-prime edge
    TCGTAGGGTT TTTGTCAGGG TGCCATTTCA TAGCCATTCG CCGGTAAGAC 
    TTCTTCAGAT CATCTTCGTT AGCATTTCGA TTCACTTTCA GAACATTGTA
    GTAATCCACC CCCATTTGAT CCAAATCTTT CACCAAACCA AACAAAAAAA
    AAGTCAAAAC CAGAAAATCG AGAGAATCTT CAGCTGTAAT CGAAATTTTG
    AAGAGAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3394747 [Map]; Strand: w
      • AT1G10350.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5832-1 - 3-prime edge
    ATTGAAAACG GTAGTAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCGAGCAAGA AAGAAGCTGA AGCTAAGTTC AAGCAGATCT CTGAAGCT

AT1G10350.1

Model type
Protein coding
Short Description
DNAJ heat shock family protein
Computational Description
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G59725.1); Has 27964 Blast hits to 27510 proteins in 3469 species: Archae - 176; Bacteria - 10323; Metazoa - 4622; Fungi - 2603; Plants - 2812; Viruses - 18; Other Eukaryotes - 7410 (source: NCBI BLink).
Link
InterPro Scan - TAIR