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13-5844-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 62999 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -411; Region: promoter
    Flanking Genome Sequence: 13-5844-1 - 5-prime edge 
    GGGANTAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTACCATC CCCGATAACC AAAACCGATG TAAATCGTTA 
    TTTGGAAAAA CATTTTTACA ACCCCGACGT AAACAAGACT CACTGTGAAT 
    TTATAAGACT TGCTATGGTC ATGAGTCAGA GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 63057 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -353; Region: promoter
    Flanking Genome Sequence: 13-5844-1 - 3-prime edge 
    GTTTTACATG ATATTGAAAA TTTCTCTATA TTTTATCTAT CTCTAATCTC 
    TATGATGAAT T

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR