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13-5861-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3900543 [Map]; Strand: w
      • AT1G11595.1 - [+] show detail - pseudogene, putative glucose 6 phosphate/phosphate translocator, blastp match...
        Distance: 844; Region: intergenic
      • AT1G11600.1 - [+] show detail - cytochrome P450, family 77, subfamily B, polypeptide 1
        Distance: -1469; Region: intergenic
    Flanking Genome Sequence: 13-5861-1 - 5-prime edge 
    GAATAGCAGT GTGATTCCTC TGTTTTTCTA TGTTTTGGCT TGCTCTGTTT 
    TCGTCAGGGT TTATGTCTAT CATTTTCGTA CATTGTTGAA TATTATAGCA 
    TCACACCATC TATAGATTCT TAACAAGCAA CCTTTAGAAA ATCTTTTAAA 
    ATATTATATA AAACAAAATA TGAATTAAAA AAAGTTAAAA AAAAACTCTT 
    AAAAGANAAA AAATAGGTTT TAATTAANAN ATTTTTGATA CACTTTTTCT 
    TTTGTTAAAA GCCCCCTATT TCATTATTAT TTTGNATATC AAAAATGTTA 
    ANAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3900428 [Map]; Strand: w
      • AT1G11595.1 - [+] show detail - pseudogene, putative glucose 6 phosphate/phosphate translocator, blastp match...
        Distance: 729; Region: intergenic
      • AT1G11600.1 - [+] show detail - cytochrome P450, family 77, subfamily B, polypeptide 1
        Distance: -1584; Region: intergenic
    Flanking Genome Sequence: 13-5861-1 - 3-prime edge 
    CGCTATTCAT CTTCCTTCCA TCGTTGATTG TGTTGCTAGT ACTAACCCTG 
    ATTGCAGTTT AAAACATTTG TGAACATTGC TTGTTTCGAA ACTGGGAGAT 
    CACGATCGTA ACTCAACATA TATTTGAGAA ATTGTGGGCC TGCCAGAAAT 
    TTGTATAGCA ACTCCACAAT AAATTAGCCA TATTGACCCA CGAGTCAGCT 
    CATCACTTCA CCAAGACACA TAAGAAGAAG AACAAAAACG AGCAAACTTC 
    CAATAAGTGA AAAGAATAAG GAAGCT

AT1G11595.1

Model type
Pseudogene
Computational Description
pseudogene, putative glucose 6 phosphate/phosphate translocator, blastp match of 60% identity and 2.3e-78 P-value to GP|2997593|gb|AAC08526.1||AF020816 glucose-6-phosphate/phosphate-translocator precursor {Solanum tuberosum}
Link
InterPro Scan - TAIR

AT1G11600.1

Model type
Protein coding
Short Description
cytochrome P450, family 77, subfamily B, polypeptide 1
Curator Summary
member of CYP77B
Computational Description
"cytochrome P450, family 77, subfamily B, polypeptide 1" (CYP77B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 32592 Blast hits to 32103 proteins in 1633 species: Archae - 48; Bacteria - 3170; Metazoa - 12143; Fungi - 6852; Plants - 9226; Viruses - 3; Other Eukaryotes - 1150 (source: NCBI BLink).
Link
InterPro Scan - TAIR