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13-5933-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3732970 [Map]; Strand: w
      • AT1G11160.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -169; Region: promoter
    Flanking Genome Sequence: 13-5933-1 - 5-prime edge
    GGGNNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGT GTTATTCTCA TCATCAATGA CATAAATAAA
    CAAAATAAAA TAAAACATAA CAACCGGAAA TGTGTGTTTT TTTTTAATAA
    ANAATTGAAA ATGACAGAAT CTGANAAAAA GGACNAAAAA TTCGTCGCTT
    TACTTTTTTT TATNTTCNNC NNTGNTTTGN TCGNCNGNNC GGGCCNCTNT
    TTCAAAAAAN NNNTTNTTTT NTTTNTAANN TCTTNTTTAA ATNNNTAATN
    NCANCNGGAA NCNATCNNTT NTGNCNCAAG NTTNTNTTTT CCNAATNNCC
    CAAAAATNTT CAACNNTGNN TTGGCGNCTA NTCNCATTTT GAATTTTTAA
    ACCNNCNCCN ACNTTTTTTN GGTTTNAATT CTTTTCNANT CANAANAAAG
    GNNGGGGATT NGGCTTCNNC TTCNTAGNCC CNTGAATNTN CNGAAATCGA
    GTNAAAAANG GNNAANCGGG GATTTNANCT

AT1G11160.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR