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13-5947-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29330029 [Map]; Strand: c
      • AT1G78000.1 - [+] show detail - sulfate transporter 1;2
        Distance: 0; Region: exon2 (CDS)
      • AT1G78000.2 - [+] show detail - sulfate transporter 1;2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-5947-1 - 5-prime edge
    CCGAGCATAA ACTGCTTAGA CTTAGGCTGA TCCTTAAAAT CCCTAAGAGG 
    ATCATCATGA AAGAAAGTTT CTTTGAATGT GTACATGAAC TCCTTGAACA
    TGTTTTGCTT TGGTGGGATT CCAACTTTAT GCCGAGTGGG TGAAGGTTTC
    ATCGGAACAT GTCCACCGTC CGTCGTCGGA CTTCCGTCCA CAGGGTGAGC
    TCTTGACGAC ATAGCTATGT ATCTCTGCAA ACAGAACACG AGACTACTTA
    GATTAGTACT TTACTTTGCA AGTTTTTGAG ATTATATAAA TTGTGTGGAT
    GGAGTAATGG TATCGAACCA GGAGAAAGGA TAGAGATAAT TGGGTTGAAA
    GATGACTTTT AAGTGTGAAT TTTGGAGCAA CATTGATGAA GCT

AT1G78000.1

Model type
Protein coding
Short Description
sulfate transporter 1;2
Curator Summary
Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.
Computational Description
sulfate transporter 1;2 (SULTR1;2); CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;3 (TAIR:AT1G22150.1); Has 10127 Blast hits to 10032 proteins in 1879 species: Archae - 35; Bacteria - 6193; Metazoa - 1167; Fungi - 451; Plants - 560; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G78000.2

Model type
Protein coding
Short Description
sulfate transporter 1;2
Curator Summary
Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.
Computational Description
sulfate transporter 1;2 (SULTR1;2); CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;3 (TAIR:AT1G22150.1); Has 10127 Blast hits to 10032 proteins in 1879 species: Archae - 35; Bacteria - 6193; Metazoa - 1167; Fungi - 451; Plants - 560; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink).
Link
InterPro Scan - TAIR