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13-5951-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17706294 [Map]; Strand: c
      • AT4G37685.1 - [+] show detail - unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BL...
        Distance: 205; Region: intergenic
      • AT4G37690.1 - [+] show detail - Galactosyl transferase GMA12/MNN10 family protein
        Distance: -1600; Region: intergenic
    Flanking Genome Sequence: 13-5951-1 - 5-prime edge 
    ATTTTTGTGG ATTAACCCCT TTAGAAATCG TAGACACGCG CTCAACGCGA 
    CATGAGTGAG AGTGGCTGTG AAATAGCACG ATTGGTAAAA GTGGGGTATG 
    AAGTGGAGCT CTCTCATTGG CTAAAAATAT AAAAATAGTA GGGGAGCTCC 
    TCCTCTCATA TATTGAAAAC AATAACAAAC AGTGTATTTT AACCACTACT 
    AGTTATCTTT AACTCTATCT CATATCAACA AACCGTTGTG ATATCCTTGA 
    GACACGTCCT AACAACAACT TACACATCAA CCATTGAACC CAGATGCACT 
    TCCTGCTGTA ACCTCAGTCT GCAATGCTTT GTCTTACATG CAAACTCCAC 
    CAGAACTTAG TACCATCATC ATTAACAATT TCCAGACTCA AACTAGAGCC 
    TTTGTCTTCT TTATGATTCT CTGATACTTT GAAAAAACGT TCACTTGACT 
    AACCTGCAAG TGAATTTCCC TTGAGTAGTT ACTTATGTAA TCTTCTCATG 
    ATGCAGACAG CTAACTCAAA CTCCTTAGTT ACTGTCTTCT AAATGCAGTT 
    TAAATTTCTT GCATTTGCTT CCTTCTAGAG CTTCTTTTCA GCCACTGCCA 
    CCAGCATTGA GATGTGTCGT TTATCAAACT AGATACATGA CACTTTCACA 
    TTATTGAAGT GAGTAGCCTT GANACAGTTC ATGCAGCACT TGCACTTGTC 
    TCTTCCATTT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17820816 [Map]; Strand: w
      • AT4G37895.1 - [+] show detail - other RNA
        Distance: 5638; Region: intergenic
      • AT4G37900.1 - [+] show detail - Protein of unknown function (duplicated DUF1399)
        Distance: 921; Region: intergenic
    Flanking Genome Sequence: 13-5951-1 - 3-prime edge 
    ACAAAAATCA TGCATTTTTG GATCCACGCA CCTCATTCTC AAAAACCCAT 
    CGCGTGTCGT ATTTTTTTTG GTTTTCTTCT CTAAACCAAA TTAAACCGAA 
    CCGAGATCAA TTTGAATTTC AAAACCAATG TAAACCCATC GCTGTGAAAA 
    CAAAAAGCTC GGCCACTGTA ACAACAAAAA TGGAGACGAC ACAACTTGGA 
    AGAGAAATCA ACTCGAAATA GCCAAGAGAA TGTTCGAAAA CCCCCTCAAA 
    TCCGATGCTT CCTTTGATTC CAACCTCCAA AAGCCCATCT GCTCAAATCT 
    TCATTTCGAG GACGAGGACT CGA

AT4G37685.1

Model type
Protein coding
Computational Description
unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37690.1

Model type
Protein coding
Short Description
Galactosyl transferase GMA12/MNN10 family protein
Computational Description
Galactosyl transferase GMA12/MNN10 family protein; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT2G22900.1); Has 507 Blast hits to 506 proteins in 109 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 185; Plants - 285; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37895.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G37890
Link
InterPro Scan - TAIR

AT4G37900.1

Model type
Protein coding
Short Description
Protein of unknown function (duplicated DUF1399)
Computational Description
Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink).
Link
InterPro Scan - TAIR