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13-5953-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 611283 [Map]; Strand: w
      • AT4G01450.3 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 567; Region: intergenic
      • AT4G01455.1 - [+] show detail - pre-tRNA
        Distance: 583; Region: intergenic
    Flanking Genome Sequence: 13-5953-1 - 5-prime edge 
    CTGTNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAGG AGATGGCACA CGAAAGGAGT GAAAGCTCAA 
    TCACTTCAAA AAGATTTTTA GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 610769 [Map]; Strand: w
      • AT4G01450.3 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: 53; Region: intergenic
      • AT4G01455.1 - [+] show detail - pre-tRNA
        Distance: 1097; Region: intergenic
    Flanking Genome Sequence: 13-5953-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAGACT 
    GAATAATTTG TTCTGTCAAT TAAGGTTATA TTCGATACTG TTTATTTCTG 
    TTTTTCGACA CTGTTTATTC ACATAAACAA ATTACAGTAT CCAAATGAAT 
    CCCGTAGGAA TTAAAATCCC AAAAAAACTA AACNGTTGCA ACACAAGTAC 
    GAAATTGTCC AATAAAAGTA TGAAATAGTC CAATAAACAA TGAAAACGAT 
    CGTTATCTTC TCTTCTTCAT ATTTCATTTT TTGAAGACAT ATCGGTCATG 
    ATTCTTGTTG AACAAGCGTG TTTAGGGAAG TAGATCAAGG AGTCATCGGA 
    ATAACCAAAA GTTGACCGTT GTTAACATTT GTACGGCCTT CCTCTTCCTT 
    TTCTTCTTCC ACCGTATTGG TAGGCAACTT CATGATCTTA CACTCTACTA 
    TTTGCTTACT CCTACTCCAT AGAAATATAT ATAAACCGAT CACAACCACC 
    ACAGATCCAA TAACGCTACA ACAATAATAA AAGTTTAGTC CATAACATGC 
    ACATGATATA ATATATTCAA GAGGTTTATA TAGTTAAAAT ATAAAGGTTA 
    ATACAGTTAG ATTTTTAATA ATATACCCTT CCCAAATAAA TCTCACGATG 
    AAGAATCAAG AAATCGAACA CGGNTGCAGG ACATAAGCCC GGACAGGACT 
    AAATGATGAN GAAACCNACA NGTCCTTGTT GTTTGGATAC ACCACGGANN 
    TGCCCCACCG GNCCNCATAC CCTTGGGCN

AT4G01450.3

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01455.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Glu (anticodon: TTC)
Link
InterPro Scan - TAIR