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13-6026-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9451063 [Map]; Strand: w
      • AT1G27200.1 - [+] show detail - Domain of unknown function (DUF23)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-6026-1 - 3-prime edge 
    GTCCTAATGC TCCTTTGAAC TATTCTTCAT CTGTTGATTT GCAATTCCGT 
    GGAGATTTGG TGAAGAAGAA GATGAAGAAA CAGAGCCGTC GTGTTCATAA 
    TTGGGAAAAG GTTGGTTATG AGGCGGTGAT TGACGGCGAC ACNGGTGGTT 
    GTGTTTGTTA AAGGATTGAC TCGAAGACCT CACAAGGAAT CAGATCCTTC 
    TTACTATAAG TGTCAATTTG AGATTGAGAA TT

AT1G27200.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF23)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1); Has 321 Blast hits to 319 proteins in 87 species: Archae - 0; Bacteria - 165; Metazoa - 2; Fungi - 4; Plants - 113; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR