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13-6028-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3732510 [Map]; Strand: w
      • AT1G11160.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -629; Region: promoter
    Flanking Genome Sequence: 13-6028-1 - 5-prime edge
    CTTTTTTTTT ANAATCAAGA AGTGGCAGTT AATTAGTCAT TTAGTATGAT 
    CCAGTTGTAG TANATTGTAT CCGTGTATTA TNGGTTATAC GAAAAATTCA
    ATGNGGTATA AAATTCAATC TTAATTCAGG CCGTTGAGTT GGTTATATTA
    AAATGGAATT AGTTGACGAG TATTTTATTT ATTTCAATCA AGTTGNGTGA
    TTGACATCTT AAAAAAAGNG TTAAAACGTA TTGCGATTTA CCGGTAATAC
    TTGTTATTTT TCTTTTTCGT CAAACTGAAC ATAGTACTTA TTAACTTNGT
    TTTTTTTTTC CNTTCCNGGN CCCCNANCCN GNAAAAAANN ANTTTTTNAA
    ACCCNCNAAA AAAAAAAAAA NAANTTTTNA AANTTNNANC CCCCNNTNGG
    GNNCCNGGGG GGNCNTTTTT TTTTTTNGGG GGGGTTTNNC CCCNCCCCCN
    AAAANTNTAA AAANNGGGGG GGTTTTTNTC NAAAAAAAAA ANNNAANGGG
    GGNCNANTTT TNNNANNTTN CCNNAAANGG GGGGGGGNTT TNCCCCCCCN
    NNNNGGGNCN NNNNNNNCCC

AT1G11160.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR