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Mutant Lines
13-6127-1

13-6127-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 21660535 [Map]; Strand: w
- AT3G58570.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 3; Region: intergenic
- AT3G58580.1 - [+] show detail - DNAse I-like superfamily protein
  Distance: 63; Region: intergenic

AAACTAACAA AATCGGTTAT ACGATAACGG TCGGTACGGG ATTTTCCCAT 
CCTACTTTCA TCCCATATTA TTCTCATGAG CTTTTTAGTC ATACAAAGCA 
GTTCAAACAT TAAAATTGAT CCAAGGAAAA GAAAAGTCAA AGGGTTTTCA 
CTATATTGAG GATCAAAATG AGATATAAAA GGAGGTTTAG ACAGAGCCAC 
ACAGGGGTCA TAATAAAGAA TGACCAACTT CATAGAGTGG TTTGCCTTAC 
TCAGAATCCC TTTGAATCTT TGTGTCATCT CTATCACAGA TTTGGTAAAG 
GTTTCGTCTA AACAGTTGAT GTCATAGTCT GATCAAAGAA GAAGATCGGA 
ACAAACAAAA AAAACCTATC TGTAAGCAAA TGATGGTGGG TGGTGAAGGC 
GGTTAACCGC GTCTTGTCCT AGGCGTGCAT CGAAATTCAG CTAAGAGAGC 
AATGTGATTA GAAGACCATT CTGGGGAAGG AAGAGCTGTG TCTTTTCTTA 
ATCCATCTTC ATCCAGTAAT TCCAATAGAG ATTCCACCAC TAATGTATCC 
GCTGAAACCC AAACACAAAA AAATCTTCCT ATTAAGTTAA CTTGTTATTT 
CTGATGTAGT TGAAAACAAG TACAATGGAG TTAAAAATGG TGAAACCTGT 
GTANAATATG TAGTCATGAG TGCCGATGAA GTCCCTTGTA CAATTGGTAA 
ACAAAGGCTC GTTTGTATTA AGATCTATTC TCCTTTCTGG GTGGTTCCAA 
N

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 21660520 [Map]; Strand: w
  - AT3G58570.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: 0; Region: exon7 (3UTR)
Flanking Genome Sequence: 13-6127-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGT 
CTATAGGGGG TTTTCTTTTT TCACATTGAA CAAAGAGACG ATTCGTGTCT 
ACTACATAAC CATTTAAAGA GCAAACATAC ACATCTGTGG CTGCTCCCTA 
ATAATAAACA ATAGAGATAA GTGAGAGAGA AAGAGAACAT AATCGGTTCT 
TGAAGAATTG AAGTTAAAGC T
```

AT3G58570.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G58580.1

Model type: Protein coding
Short Description: DNAse I-like superfamily protein
Computational Description: DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58560.1); Has 1306 Blast hits to 1271 proteins in 209 species: Archae - 0; Bacteria - 7; Metazoa - 532; Fungi - 229; Plants - 279; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink).
Link: InterPro Scan - TAIR