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13-6151-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19692070 [Map]; Strand: c
      • AT2G48160.1 - [+] show detail - Tudor/PWWP/MBT domain-containing protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 13-6151-1 - 5-prime edge 
    CAGCCACCAC TTCTTGGAAG GGTTGGGCAA CAGATTATTT GAGTATTTTT 
    GGATTACCTG GTTGATGAAG AAGGGATGAC TTTTGCATAT TTTAGTGTGT 
    TTTGTGAGAG TATTCTCGTT TGCAGTATTC GTTGTTAATA AGTCTTGATG 
    AACCTCCTGA ACTAGGCTAT GGAGATTTTG GCTCATACTT TGGAGAGTGA 
    GTCAAATTTA AAGAGGAGGG TGGACTTATT TTTCCTTGTG GATTCTATCG 
    CTCAGTGCTC CAAAGGTCTG AAAGGTATGT CGTATGTGCA ATGAGTTTTG 
    ATAAGCCGCA TCAGCAAAGT TCTAAATGCG GAATTGACCT TGAATACTAC 
    CCTATTTTTC AGGTGATACT GGTTGTGTTT ATCTTTCAGC CATTCAAGTA 
    ATTTTACCTC GTCTATTGGC GGCTGCTGTA CCTGCTGGAG CTACCACACA 
    AGAAAATCGG AAACAGTGCT TAAAGGTATG CAATAATATT TGCTAGCTCT 
    TTCGGATCGT TATTGTTTCT CAACCTCTCT GCTATTTATA GGTTTTGAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19692186 [Map]; Strand: c
      • AT2G48160.1 - [+] show detail - Tudor/PWWP/MBT domain-containing protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 13-6151-1 - 3-prime edge 
    GGTGGCTGTC AACAGTATCC TACGAAGCAC ATGAAACAAT AGCATGATTC 
    ACCTTAATAC TATGTTTGAT TTATCGAAAT TATTATGCAG CCTCTTCTAT 
    CCCAAAGATA CGTACTATTA TTCTATCTAC ATGGCCTACT ATAGAAAATG 
    TTGCTTCAAA AACACAGATG CAACATATCT AGGTACTATA TTAACAATAC 
    GTCAGTAATG AGGACAACAA ATTTGAAACC CGCAAAAGCT GACCCACCCT 
    CTATATGACT TGTTGCGGCA ACAGATAGGT AATCAAAAAT TGCAGAAAAA 
    TAAATTTTGC TACCTTTGCA GACACACCAA ATTTCATCAA GTCCATAGCC 
    AAACAAGTTG CTCGGCCAAT ACTCTCCTTT GTCCTCACCA ATGAGCAAAG 
    TGCATCCTCA TAAGATTCAC GAGTGGATTG CACATCACAA CTAACAACTT 
    TCTGTCCCTG ACATACACCT GTTTCGATTT TCTCTTCTTC TTTGACAATG 
    GCATCACAAT CATTTTTCTT CTCACCAGTT GGAATATTTG GGCTGCCACT 
    ACTGTNGTTC TGCATATCAT TTGCACTTTC TGAAGTAGAA ATGTGGTAAT 
    AAACTGAGCT GCTATGTGGA GTGCCCCTCG CAGGAGTGTC TGCAGTATTA 
    AGCAGGAGAA AAACTCATTT TTTCTCTTGA CAGGTTT

AT2G48160.1

Model type
Protein coding
Short Description
Tudor/PWWP/MBT domain-containing protein
Computational Description
Tudor/PWWP/MBT domain-containing protein; CONTAINS InterPro DOMAIN/s: RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT3G63070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR