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13-6162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 880792 [Map]; Strand: c
      • AT4G02010.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -298; Region: promoter
    Flanking Genome Sequence: 13-6162-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    AGGAAAGGAT TTTTTATTTT TTCCGGTTTA ACATTGGTTT TCATTTTAAC 
    TTTTAACGGA TCAAAATATT AACAGAGAAG TCCGATAGTG ACTGACTGAC 
    TGACTGTGAC GCTTTTTGTT TTTAGCTACC GTTAATGTTT GTTTTCCGTT 
    AACGGCAGTA TTTTAGTGTG CGTGGACATA TACGCTCAAG TACGCCGCAC 
    GCTTCTCTTC TTTTTGTCGC GCATTCAAAA ACCGAAACGA TCAGAAAAAA 
    AAAAAAAATT TTAANTAANC TTTTNGGACT AANCAATTNT TATTCTTTTN 
    AAANAATTNC NCNAANGAAA AAAAAANANA NANANANANA NANGGNCCTT 
    NTNCNGNNCT AAAANCNGNG NNAANCCAAA AAANTCNCCC CCANCGNAAT 
    NTTTTTTTTN GGGGACCTAA AAATCGNGGG GNANAAGGGG GGNTTNTTTT 
    TTNNGGGTTN ACGNANCTNN GTTNANGGGG GNAAANANAT NTNTTTTNNG 
    GGATAACNAN CCGGGGCNGN NAACCACNCG GGGNCNNAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 880721 [Map]; Strand: c
      • AT4G02005.2 - [+] show detail
        Distance: -980; Region: promoter
      • AT4G02010.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -369; Region: promoter
    Flanking Genome Sequence: 13-6162-1 - 5-prime edge 
    CTTACAATGG CAATGGTATC GAACAATTTA CTTAAGGTTC TAAAGGTGAA 
    GTGGCAGTAC AATATTTTCG AAAGCT

AT4G02005.2

Model type
Other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR

AT4G02010.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink).
Link
InterPro Scan - TAIR