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13-6174-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)
    (Flowering & Growth::growth defective)
seedling (PO:0008037)
  • desaturated green (PATO:0001272)
    (Seedling::pale green)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1214653 [Map]; Strand: w
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-6174-1 - 5-prime edge 
    GGGNTAAACT AACAAAATCG GTTATACGAT AACGGNCNGT ACNGNAATTC 
    TNNCNTNCTA CTTTCATCCC TGCCGAGAAG TGAGGAGAGA GAAGGAGTTA 
    TGTGTTTTTA ATAAGGGAAA AATGAGAGAC AACGAACAAA AAAACAGAGA 
    AAAATGAGGA GGTGGAGGAA GACGAGAGAC AACNTTGGAA AAAGCTAGGC 
    GACAACAAAT TTCTCTGTGC TAAGGAAGGA GAGAGGATGT GAGTAAAATG 
    AGGAAGCCTC ATGAAAACTT AACCATAATT AGCAAATCTC CTATTCCAAG 
    TAACTTTTGC CAAGCCGAAT CTCTTGTTTT TCGTAAATTC CATATGTATT 
    CTCTTCCATA TACACAATCT TTTGAGAGAG AAAAACAAAA TCCAACCTCA 
    CTTTTGTTGA CAACAGAATC CAGCATAAAA CATTGTTGGG AAACTTGTTA 
    CTCAACATAC TTTTGCACCT GGTTGTTGTT GTAGTTGATG TATCCGGAGA 
    AAAGAAGATA AGATTCGGGT CAATACTTAA TCTCAATTCT GTCTGCAGCA 
    GTTACTTAAA CGGTGTCCTT TAATTGTTAA CTGGATAACT ATATTTTTTA 
    TGATCTTATG ATGGGATTTG TTTCAAACTT TCAATTAAGG TCAACTATAC 
    ATCAATCAAG TGGCACTGGT CAGGACCTGA TCATTGATTC TTTCAGTTAT 
    CTTTTAACTT TGAGAAATAT GGAATCTCAT AATCCTCAAG CAATTTCANA 
    TTTTAGGAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1214648 [Map]; Strand: w
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-6174-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATACA 
    TCTGATTTCT TAAACCCGTA TCCGTCTGGT TTCTATTTCC TTCTTGCCTC 
    CCCTCCGTGA TGGTTCGTCA TTCTCGGAGG GAGTCCTTTT TCGACATGGT 
    TGGCTTTGAG GTTTGTCCTG ATACCGATCT TCTTTGGCCA TTCGGGAAGC 
    T

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR