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Mutant Lines
15-0038-1

15-0038-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7645634 [Map]; Strand: c
- AT1G21750.1 - [+] show detail - PDI-like 1-1
  Distance: -66; Region: promoter
- AT1G21750.2 - [+] show detail - PDI-like 1-1
  Distance: -67; Region: promoter

GCTCTCAGAG ATATTTATCA CTGCAAAACA CGAAAACTGA ATGCTCCTAA 
ATTGGTCATA CATCCACGTG GCTATCTCTA ATTGGGTATT ACGTCGTCAT 
AGTTTATAGG GATTTGGCAA GAATTTTAAT GTTTATACAG TGTCTTGATA 
ATTTTGACCT AGGCCGTTAT AAAATTTATT TAGTTATTTA CTCCATTTTA 
CCAGCAGTAA AAAGTAATTT TAAGAAGAGA AAAATTGTCT AAACCGAAGA 
CACACTATTC CGCACCAATG TACAAGCGTC ACGATATCGA CAATGACGTG 
GCTTCTTCTC TTTCGTTGAT CTTGTTGTGA GATC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7645750 [Map]; Strand: c
  - AT1G21750.1 - [+] show detail - PDI-like 1-1
    Distance: 0; Region: exon1 (5UTR)
  - AT1G21750.2 - [+] show detail - PDI-like 1-1
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 15-0038-1 - 3-prime edge
```
CTGAGAGCTA ACCCCGGAGA GCTTACAGAA TTCAAGCTAA ACATTGTTAG 
AGAGAAAGAG AGAGCGATAA TGGCGATGAG GGGCTTCACA GTTGTTTTCG 
ATC
```

AT1G21750.1

Model type: Protein coding
Short Description: PDI-like 1-1
Curator Summary: Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.
Computational Description: PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 31573 Blast hits to 17834 proteins in 2924 species: Archae - 337; Bacteria - 15428; Metazoa - 5451; Fungi - 1644; Plants - 2422; Viruses - 29; Other Eukaryotes - 6262 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21750.2

Model type: Protein coding
Short Description: PDI-like 1-1
Curator Summary: Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.
Computational Description: PDI-like 1-1 (PDIL1-1); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-2 (TAIR:AT1G77510.1); Has 30765 Blast hits to 17459 proteins in 2902 species: Archae - 337; Bacteria - 14753; Metazoa - 5498; Fungi - 1629; Plants - 2433; Viruses - 29; Other Eukaryotes - 6086 (source: NCBI BLink).
Link: InterPro Scan - TAIR