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15-0078-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17001712 [Map]; Strand: w
      • AT4G35890.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: 879; Region: intergenic
      • AT4G35900.1 - [+] show detail - Basic-leucine zipper (bZIP) transcription factor family protein
        Distance: -2883; Region: intergenic
    Flanking Genome Sequence: 15-0078-1 - 3-prime edge 
    GTAGAGAGGG CCTTGGATAA CTAGATCGTC TTANACTTTT AGGTGTAGAA 
    AAGTCAGCTT TCATTATTAC GAGAGATCTA CATTATACTG TTATTACGTT 
    AAGCT

AT4G35890.1

Model type
Protein coding
Short Description
winged-helix DNA-binding transcription factor family protein
Computational Description
winged-helix DNA-binding transcription factor family protein; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT5G66100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35900.1

Model type
Protein coding
Short Description
Basic-leucine zipper (bZIP) transcription factor family protein
Curator Summary
bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia.
Computational Description
FD; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif 27 (TAIR:AT2G17770.2); Has 747 Blast hits to 421 proteins in 73 species: Archae - 0; Bacteria - 6; Metazoa - 144; Fungi - 40; Plants - 193; Viruses - 0; Other Eukaryotes - 364 (source: NCBI BLink).
Link
InterPro Scan - TAIR