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15-0141-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3371444 [Map]; Strand: c
      • AT3G10760.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 217; Region: intergenic
      • AT3G10770.1 - [+] show detail - Single-stranded nucleic acid binding R3H protein
        Distance: 820; Region: intergenic
    Flanking Genome Sequence: 15-0141-1 - 5-prime edge 
    GGTATGANTA AGGATGTAAG AGCATCACAT CCTCTTCATT CNGATTCTGC 
    CTTCCCATTG NCTTTGTCTC TTTTGCTTAT TGGTCTCCTT CATGATCATT 
    TTCACATTGN ACTATTGCAT CATTGATTCT TGTAAATCAA AACCTTATAA 
    TATATGGAGT TAAAAAGGTG ACTGAATAAA CAGTTTCAGC AATTCCAATA 
    TACTNTTCAG TGTAAAAGGC TACAACCAAA CTCAGCTAAA CTCAGCCTTT 
    AANAACAAAT CTACAACACN AATGGGAAAG CAAAGAACAT TGTGAAGTAA 
    GTNTTTGNTT TTTTCATTCT TTTTTCCAAT CTTGANTTTG TNCGTACGGA 
    TGTACGTTCA AAAGTAAACT CATNNTTACA TTAATCTTAC NCAANGANAG 
    CTACAANGGG TTAATACAAG CCTNGACCTG AAGGTGCTTG AACTNCAGAT 
    ACAGAANCTT GTACCACACA TNGANNCCTG GATNTGTATC AANTGNTAAC 
    CNGGATAANA CTGNNCNGAG TAAACGCNNC CGGTNTNAAA CCGATGNANA 
    ANANCGANNA NCTTGANTCA TGATCTTNAA NACNAGCNGA GAACATTTTG 
    NGACATNCTA NAACAATGAC GGAAAATCAA ACAANNNGAG CCAATGGNTN 
    ANNACNCCNA CNNNGNGTAA ANAATCNNCA NNNNNGANNA CGGAATTACN 
    NGAAAAGACN NGNACCNGNN A

AT3G10760.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10770.1

Model type
Protein coding
Short Description
Single-stranded nucleic acid binding R3H protein
Computational Description
Single-stranded nucleic acid binding R3H protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Single-stranded nucleic acid binding R3H (InterPro:IPR001374); BEST Arabidopsis thaliana protein match is: Single-stranded nucleic acid binding R3H protein (TAIR:AT5G05100.1); Has 376 Blast hits to 376 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR