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15-0179-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18729844 [Map]; Strand: w
      • AT1G50575.1 - [+] show detail - Putative lysine decarboxylase family protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G50580.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -987; Region: promoter
    Flanking Genome Sequence: 15-0179-1 - 5-prime edge
    GGGCANNCNA NGGGNANNCT NTNNAGNCTT NNAANCCGAN CNCNGCATCA 
    NAAGANNNGN ATNAAGACGN ACGNCTGNNC TTCTTCATTC AATTGAACAA
    GAAAAAAGGC CAAGACTTTA ACAGGAGATA TCAGAATTTA CGCNTTGTTC
    TTGTGTTTCT AATTCTCTAA GGACTTGGCT ATCTAAGCAA AGTCAAACTC
    TTTCTGCTGT GATGAACTTG TTCATGAAAT TCTATTGCAA AGACTAGAAA
    TGAGAACCAA TTTAATGAAA TTCTAACTCA GATTCGAAGC AGAGATTTTA
    GTATGTTACC TCAAATGGGC TACTTCTCTC AACAAAATCC TCAGACTTAA
    CAGACCTGCA CTTTAGAGCT CGAGCTGAAT ATGCCCTAAT GGAATGATCA
    AACCTCAAAT TCAGAGAAAT TGGATCTCTT TCTGTCAAAG AGCTAGCGAG
    TTTTTGTGTT GGTGAAGGAG ACATCTTCGA GGATAATCGG AAACTCCNTG
    AGGAATCCAA CATNGAANCC NCCATTNNNC NGATTGTCAN TTCCTTTAAN
    TGGGGTCCCN AACAAANTAC TCTNAGGGCT NTNCAAANTG GNATTNNNGA
    TCTTGNNNGN ACAAAAAGAT GANAGTTTTA TGTCCGGNNA ANNTNACNGG
    NTTNCCGNGA NTTNNTCCNN NTTGGGGGNN AGGGCGTNNA NAATAAAATA
    AAAA

AT1G50575.1

Model type
Protein coding
Short Description
Putative lysine decarboxylase family protein
Computational Description
Putative lysine decarboxylase family protein; FUNCTIONS IN: carboxy-lyase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); Has 3310 Blast hits to 3310 proteins in 987 species: Archae - 6; Bacteria - 2367; Metazoa - 4; Fungi - 47; Plants - 208; Viruses - 0; Other Eukaryotes - 678 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G50580.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G29630.1); Has 5113 Blast hits to 5079 proteins in 305 species: Archae - 0; Bacteria - 165; Metazoa - 326; Fungi - 12; Plants - 4590; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR