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15-0195-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27086581 [Map]; Strand: c
      • AT1G71960.1 - [+] show detail - ATP-binding casette family G25
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-0195-1 - 5-prime edge 
    TTGATGTGTC CCTCGTTGAC GATGGTCGTC GCGCTGGCTA CAAATTTAAT 
    TACTTGATTT ATTGCTTTGT CTTTGGAGTT AAACTAGCCC TAATCTATAG 
    CTATTACATT AGTACNGGTT CTAGCATTAG ATTAATATTG ATATAGCATC 
    CTTTTTCTCA CCGTTTTTTT TCCAATAATT GTTTATTCTA AAGTTAATAA 
    TTATGGGCAA TTGGGGATAC GTGTTAAGTC TTTCTTTCTC TTCTTTCGAG 
    TATGATTTGT ATGATTTTTG GGGTCTAACA TTTTGGCATA TTATATATCA 
    TCTGAATAAA TGTTATTCCC TGCTTTTATA TGAAAATCTT TTATCGCATT 
    ACCCATTACA CTATTAAACC ATGCTTTTTA TTTATTTTTG AGGGATAATA 
    AAAAGAGAGG AAAATGATNT TAATTTTGGT TGTTTTTAAA AAACGGGTGT 
    NTAGGAAAAC ACCATGTGTC TAACTGGTTA CAANATNACG TATGGTTTTA 
    NCGATGGCCN TNNGGGTNNN CNGTTNCCTN TTTNTCCANC TTTTTCAAAA 
    AATNANTNNN NACTNTGTNT TGANACNATA NAAAANNNTN CNANNAANNN 
    ACNNANCNGA AGNGNNNNCC CNAANAANAN ANATAANCCN TNCANNNNNN 
    NANCNNAANA NNNAAAANAN NAANNNAANA ANANNAANNN AAAAAACNAN 
    NAANAACACC NANC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27086697 [Map]; Strand: c
      • AT1G71960.1 - [+] show detail - ATP-binding casette family G25
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-0195-1 - 3-prime edge 
    CACATCAAAA CTTGGACTTG CATAGCTCTC ATCGTACGTC GGCGATAACG 
    TTCATAAATA AGCATTTATT ACTCTCTTTT TTTGGGGTCG AGCTGTTATT 
    TTCATAGTAG TTTTCTACAC AAATATCTAC CCTCACGGCC TCCCCACATG 
    ATCGTATTAT GCATGGTTTC AATACCAAAG ATCCATATTA TACGTATAGA 
    TATACACNGT ATAAATATGA TTTCTTTTAA AAAAAAAATN NTCCNNTNNT 
    NAGNNANTNN GGGNAAAAAN CNTTNNCCCC AANTNAANNN NAAANNGGNA 
    NNNNNAANNN NNNTNNAAAA NGTTTNNGGT NANTCNANNC NNNNAAGNAT 
    TAANGTAAAT NNNNGGGTAA NNCCNNNCCN TNCGNAAANN AANGTTAAAA 
    NNCNGNTTTT AAAAAAAAAA CGNCCNGTNN CNAAAANNAA AAAAAAAANN 
    ACCNGGNTNN NNNGNAAANN CNGGCAAAAN TCCANNGGNT CNAANGAANN 
    CCTGGGGGTN TTTTCCTTTN CCAACAAAAA ANNNTTTTCN TTNACTNAAA 
    AAANCCCCCG GTTTAAAANT TTGNAAAAAC NCAAATTNNN GGGGNGGANA 
    AANCGNNNNG ACNCNCNGGG TTTTTNCTTT NCCCANNGAC CAANCCCGGG 
    AAAAAGTNTG GGACNANNCN GGGNCCNNNG AANAAACCGG GNCNNNANNA 
    AGNNGNGNGA NNNNNNGNNN NNNNNNGNNG

AT1G71960.1

Model type
Protein coding
Short Description
ATP-binding casette family G25
Curator Summary
Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.
Computational Description
ATP-binding casette family G25 (ABCG25); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1); Has 400795 Blast hits to 363827 proteins in 4147 species: Archae - 6947; Bacteria - 316897; Metazoa - 8938; Fungi - 6866; Plants - 5594; Viruses - 13; Other Eukaryotes - 55540 (source: NCBI BLink).
Link
InterPro Scan - TAIR