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15-0198-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171789 [Map]; Strand: w
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0198-1 - 5-prime edge
    CCTCAAGCTC TTTAGCTTGC ATCAACTGAA ACTTCTCTTC AACAATCTTC 
    TTAGTCTCAA GAGTAAACGA ACTCCATTTC TGCCTCACAT AATACTCATC
    AATACCCGAA CCAGCAATCA TCCTAGCAAG AGACGACTTC TCAAACCAAT
    CATCTCCATT AGTTGAAGAA ACACCAACAA ACGCCAAGTC TTGCTTTACA
    GAATCAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171673 [Map]; Strand: w
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0198-1 - 3-prime edge
    GCTTGAGGCT ATGTTGGAGA AGAGTGTGCG TTTGACTGAC CTTACGTCTT 
    ACTTCGTTGA TGCTTCGAAG AACTAGAGCT ATTAGTTACT TAGATTTGTC
    GGTTTTTTGT ATCGGAATGC TATGCATAAT GCTTTCTTTT GTTTTTCGGA
    TTTAGGATTT GATTCTTTCT GGTTTGTTTT TTTGGGGTTG AAAGATTCTC
    TACCTTATAA TATTTATTTT TTTATTCGTC AACTTGTCCT TATTATACCT
    CATCTTTGTC TTTTANAAGT TCTTGTACCA ACTCCAAGAA CGAATCTATG
    TTCCTGACAA AACCGCCTTG TAGCATTGTT AGGTAAAGCT ACCANNCCGG
    GCCGNCNACC ACGCNTGCCN TNTANNNNNN G

AT4G00390.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; LOCATED IN: nucleolus; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT1G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR