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15-0253-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16528108 [Map]; Strand: c
      • AT4G34590.1 - [+] show detail - G-box binding factor 6
        Distance: 4878; Region: intergenic
      • AT4G34600.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polle...
        Distance: -1117; Region: intergenic
    Flanking Genome Sequence: 15-0253-1 - 5-prime edge 
    CTAACAAGAA ACCACAACTC ATTTAGAAGA AAACCGGCCT AATTAATTTT 
    TTTAATGGAA CCAAATTCTG GATTAGAATG TTATAGATAG CATAATTTAT 
    CTTGTTAAAC ACCGCTATAT ATTTTTCTAT TACAAAATGA GAGTCAAGCT 
    GTATATTAAT ACAAAACAAT CATAGTAAAC CTGTTGGGCC GGTTAAACTC 
    TTGAATGGGC TTCGTAGTTA GTTAGTACAC GTAATAGACA TTAGAATCAA 
    CAACATACTG TACCATTAAC ATTTGCCTCG GGCCTATGTT TTAACTTACT 
    TGTGAGGCTT TATAATTGTT TTGTGCTTAT TTATAAAAGG TTGGGCTTAT 
    ATTAAGATGT TGGGCAAAGC TCTCTCGATA GAAACTTGCA CCAAAACTTT 
    AAATCCGGTA TGAACGTGTG TTGCTGACAA AGTTAATACA TGTAGATAAA 
    ATCAAAGATT TCTAGACTTC ACGGGCTTTT AGGTATCCTT TCNAAGAAGT 
    AGGAATTANA GTTTGGTGTA GGGTTCTACT CATTTATATG GACTTGTTAC 
    TTGTAACATA NAGTTTAGAC GAAACCATTC AACTAATACA TTATACATGT 
    TGGNTTCTNG ACTCTATGTT ANAGNCTAAA TACACCNAGT GNGGGGCTTT 
    CACAATAAAN AAGTTNAAAC CTTTNAATNG AAANTTNNAT NCNNAACA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16528224 [Map]; Strand: c
      • AT4G34590.1 - [+] show detail - G-box binding factor 6
        Distance: 4994; Region: intergenic
      • AT4G34600.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polle...
        Distance: -1001; Region: intergenic
    Flanking Genome Sequence: 15-0253-1 - 3-prime edge 
    CTTGTTAGGA CGTGCACTCA TACCAGCCTT AAAAAANTTA GTGACAAAAC 
    AAAACTGAAA TTTTTAACAA AAATAAATAA ATAAAACAAA CAAAACTGAA 
    ATTAAGAATC GTGAGGGTAC GGTCATCATC CACTACATCA TCTTTACTCC 
    TTTTTATGTG CAACCATAAA ATAATACGTC GAACATTAAT TATAGTGACG 
    AATCAGTTCA TTAAAGCAAA GTTCAAACAA CTTTGTTCTC TTTCCATAAT 
    CTCAATTAAT CAGTAATCCA TTTAATTTAT CATTGNGTGA CGAATCAGTG 
    CATCGAAGCA AAGTTTAAAC AACTTTGTTC TCTTTTTTCC ATAATCTCAA 
    TCAGCAATTC ATTTAAGTTT AACACTTTTT AGCAAAAAAT TATGAAAAAA 
    ATTTATGACT CTATCTTTCA GTAAGTATGT TATGATCGAT TAATTTGAGT 
    TAAACGAAGT AGGNGTATCA TATATAGTAT ATCACCTATC AGGATTTATA 
    GAGGCCTAAT CGGACATTAT TCAGTTGGGN TGTAGCTAGC GATATCTCTT 
    GGATTGGAGA ATAGGAATGG GAACTTTGAC CGATATTGAA TACCCTAGNC 
    TTCANGGATN CTACAATATA ATTATGATGN GTTNGGGNAA ATNTAAATNG 
    GGGGTTANGA TAATNGAAGG GCCCTCATAT TAAATAATCA GGGCACTAAC 
    CTCTTTNNAC TTATTGGGGG CAACAANAGG GA

AT4G34590.1

Model type
Protein coding
Short Description
G-box binding factor 6
Curator Summary
Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism.
Computational Description
G-box binding factor 6 (GBF6); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sucrose induced translational repression, negative regulation of translation, regulation of transcription, DNA-dependent, response to sucrose stimulus; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1778 Blast hits to 1778 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2; Plants - 1730; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34600.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR