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15-0256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16681031 [Map]; Strand: w
      • AT4G35040.1 - [+] show detail - Basic-leucine zipper (bZIP) transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0256-1 - 5-prime edge 
    NNTGNAGCTG GNNNTATANG CANTCTCACC CGAANANAAA AATANGGAAA 
    ATNAACGGGA TAATAACANA NTAAAAANAG GAGGGACGAG NNAGGGNNTN 
    CCNGATGATA CATGATGANA NTAGNGGGAA GAAGGGGGAA ANGAGANCTT 
    TGGGAAACCG GGAAGCGGTT AGAAAGTATA NAGAGAAGAA GAAGGCTAAA 
    GCNGGNAATT NAGAGGAAGA NGCCCGCCNA GGGGNAGGGC GGNGAATTCA 
    NNAGNNGGNG NAAAAGNANC NCGAGNNCCG GCTNNNNNGG NAANCNNNNN 
    GNNNNNNAGN TNNNNNGNNN NNNNNANNGA AATGAGNGGN AGANNNNNNN 
    NGGNNAAAAA GGGGAGAAAN AAAANAANGN GAAAGNGANA GNANNNNNAA 
    NNANNNANGA GGTAGANNGG NGAGNGANNA AAANNNAAAN AANGNAGGNA 
    AGANANANNA GAGGAAGNNN TNGANNAAGA GGAAGGNAAN ANATGNGAGN 
    ANNAAGGAAN GANGNAAGNA NAAANNGAGG NGANNGNGAG AAANGNNNNN 
    AANAANAANN NAANNGGAAN AAGTAANNAN NNAAGANNGG NGANGNANAA 
    NAAANGNATG NANAGANNAA GAGAAANGTN NGNNGNAGAA TATGNNAAAA 
    GGGANNGNGT NAAAAGAAAA GAATGNNGAG NGGNANGGTT GGNNTNGAGG 
    NANANAGGGA GAANAGNGAA GANNNNNGGN GGAAAGNGGA NNAAGNAGAN 
    AGGAAAAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16680927 [Map]; Strand: w
      • AT4G35040.1 - [+] show detail - Basic-leucine zipper (bZIP) transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0256-1 - 3-prime edge 
    GTTACATGCG TCGNCAANAG GNTCACCACG NNCNGGCNGT CTANCANNNG 
    TNCNGTAAAG AAACTATGAC ATCGGAACNT NTCTGCTANG NGGTNATNNA 
    CNCATNTNNN AACTCNAAAA CACTTNCTGA TTGGAGAANN CNANCTCACC 
    GNCTTCCATT ACTAAAACCC ACCAACCACT TATTGACCTC ANCAGNGGGA 
    TCCTTTCTAG ATACAAACTT GCCGANTNAN CTAAAAGAAG NCAAATCTCG 
    AGCTNCCNAA TCAATCAAAA ACCCTAANTT CACAACAATT CGAGCAATTC 
    AGCAATAGAA AATAGTCATT TTTTACAAAA TTTGAGCATC CGAGCCTGTA 
    ATTGAGGAAA AAAAAACATA CCTTTATAGT CTNTATANAG CTCCAGATTA 
    GCGATAAGAG GATAAAANAA AANCCCTAAN GATCGAATTT TGANAAAAGN 
    GAANAAAATG GGANANATGA AGTTNTAGAG AAANAGGATC GGAAAANTNC 
    AANGGGTGGN GGAATTATAA NGGCNCACTA AANGANTGGN NTTGNNTTCN 
    GGGGCCCGGG GAAAANANAN GACCGNTCTA NGATNANNAN NTNNACNNNN 
    GTATANATNA NANNCGGGNC NNGNCNGNCN CCNGGGCNTT GAGNTNNGNN 
    NNNTNNNNGA GNGNNGNNNA NNNNNNACGG AANGANNNNN NNACCCNNGN 
    GNGGNNANNN NNNAANNNNN TNGNNNNNNN NNANNNGGN

AT4G35040.1

Model type
Protein coding
Short Description
Basic-leucine zipper (bZIP) transcription factor family protein
Curator Summary
Basic-region leucine zipper (bZIP19) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.
Computational Description
bZIP19; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G16770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR