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15-0260-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8333548 [Map]; Strand: w
      • AT1G23480.1 - [+] show detail - cellulose synthase-like A3
        Distance: 0; Region: intron1 (5UTR)
      • AT1G23480.3 - [+] show detail - cellulose synthase-like A3
        Distance: -148; Region: promoter
      • AT1G23480.2 - [+] show detail - cellulose synthase-like A3
        Distance: -158; Region: promoter
    Flanking Genome Sequence: 15-0260-1 - 3-prime edge 
    AAGTCGAAGT AAATGTTACA GTTGTACTCG TTTTTTTCTC TTATAAAAGT 
    GATGTTGACT TTTTGGTCTT AATTTTCTAG TATTGAACAT TCCTCCCTCT 
    GCTTCAAAAC TTTGTTAATT CTCTAATGAC GTGTTATTTT ATCAAGAATG 
    TTGAAACAAA TTTGCTTTTG GCTTCTTGAG GATGAAAATA TTGTAGATAA 
    AGCT

AT1G23480.1

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4758 Blast hits to 4752 proteins in 1373 species: Archae - 199; Bacteria - 3673; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23480.2

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4744 Blast hits to 4738 proteins in 1369 species: Archae - 198; Bacteria - 3660; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23480.3

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR