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15-0265-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30224090 [Map]; Strand: c
      • AT1G80390.1 - [+] show detail - indole-3-acetic acid inducible 15
        Distance: -1388; Region: intergenic
      • AT1G80400.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -1086; Region: intergenic
    Flanking Genome Sequence: 15-0265-1 - 3-prime edge 
    CTTACNGCTA CNCTANGNNN NCATGCAGTA NGGGNCGGGN CTCNGTNCTN 
    TGNTTGGGGA ACATACAATC ATAAATGATT NTTTCNANGG TTCACGACAC 
    TATTNTTAGA CCAATAAGGG CAATAAGAGT TAAACCAGGG GCTAATAGGT 
    CCTACTGGCN GACACATAGA CAGAATTTAC CGGTTTCGAT NNCAAACCCG 
    TGACCGGTAA TTCCGGTCAG CCATTGTTTT CTAAGTTTGT TTTCTTTCGT 
    TATAATGCGC ATGGAATGAA ACAGTCGTAT AATTCATTTA ACTCGACTCG 
    TAACAAAATA TGTGAGATAA TAATAAGAAG TACATAAATT TGGTAGCTAG 
    TATTTTAATG TTAATTGATA CTTTTTGNCT CAAATAATCG AAACTGGNTT 
    TAGGCTCTAT AAAACTGATA TTGATGTNTT GGACATTTAC TNGGGGNGNN 
    GTANNTTGGG NGNCNTNNNA AANNGGGNNG NGGNNNNNGG ANNNANAAAA 
    AGNANNANNG NNATNNNANN GGNNGTNNNG NGGGNGGNNN NNNNNNATNT 
    NNNTTNTTNN TNNNGGGNNN GGGNNNNGCN NGGGNNNNNN GGGNNNCNCN 
    NNNTAGNNTN NGNNANGANG NNNNNANNGN ANCNGANAGN NNANNGNGNN 
    GNNGNNGTNA NCGNTGTNNG GGNNGTNNNN NNNGNNNGGN NGTNTNNGCN 
    NGGGANNTNT NNNGNGNNGN

AT1G80390.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 15
Curator Summary
Member of a multigene family of Auxin responsive genes.
Computational Description
indole-3-acetic acid inducible 15 (IAA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 14 (TAIR:AT4G14550.1); Has 1649 Blast hits to 1649 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1649; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80400.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 10084 Blast hits to 10056 proteins in 295 species: Archae - 0; Bacteria - 8; Metazoa - 2540; Fungi - 826; Plants - 5176; Viruses - 44; Other Eukaryotes - 1490 (source: NCBI BLink).
Link
InterPro Scan - TAIR