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15-0275-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2127966 [Map]; Strand: c
      • AT5G06850.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-0275-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    GACNNGGAAG ANNATGNCNN TNNGNAAGCN NAGGNTGGNN NTNANNATNG 
    ATCGNGTGNN CCCCNGATAN ACNTGNGANN CTNACNGACG NGATGAGGNC 
    TCNTCCCNTT TTCTNTAACC CTTTNGTNTG CAAGAACAAN AAGAGGGTAG 
    GAGTGAGTGT ANATTCTATC AGCCTCTACA GTCGACAACT CGGGGGGNCA 
    T

AT5G06850.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT5G48060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR