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15-0303-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
seedling (PO:0008037)
  • albino value (PATO:0000968)
    (Seedling::albino)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7573229 [Map]; Strand: c
      • AT1G21600.2 - [+] show detail - plastid transcriptionally active 6
        Distance: 0; Region: intron1 (CDS)
      • AT1G21600.1 - [+] show detail - plastid transcriptionally active 6
        Distance: 0; Region: intron1 (CDS)
      • AT1G21610.1 - [+] show detail - wound-responsive family protein
        Distance: -693; Region: promoter
      • AT1G21610.2 - [+] show detail - wound-responsive family protein
        Distance: -693; Region: promoter
      • AT1G21610.3 - [+] show detail - wound-responsive family protein
        Distance: -715; Region: promoter
    Flanking Genome Sequence: 15-0303-1 - 3-prime edge 
    NCGTGGACNG GCATGCGTGG ANCANCNGCC CANGNCCGNC AANNNNCCAG 
    TGNNNTATNG AGCACAGACT CTANAGAAAT CGAAGAAATG AGCAATTAGA 
    GTCACTGGGA ATT

AT1G21600.1

Model type
Protein coding
Short Description
plastid transcriptionally active 6
Curator Summary
Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.
Computational Description
plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21600.2

Model type
Protein coding
Short Description
plastid transcriptionally active 6
Curator Summary
Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.
Computational Description
plastid transcriptionally active 6 (PTAC6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21610.1

Model type
Protein coding
Short Description
wound-responsive family protein
Computational Description
wound-responsive family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1); Has 560 Blast hits to 534 proteins in 143 species: Archae - 0; Bacteria - 34; Metazoa - 261; Fungi - 64; Plants - 78; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21610.2

Model type
Protein coding
Short Description
wound-responsive family protein
Computational Description
wound-responsive family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G21610.3

Model type
Protein coding
Short Description
wound-responsive family protein
Computational Description
wound-responsive family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77310.1).
Link
InterPro Scan - TAIR