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Mutant Lines
15-0339-1

15-0339-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7652322 [Map]; Strand: c
- AT1G21770.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
  Distance: -34; Region: promoter
- AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
  Distance: 0; Region: intron1 (5UTR)

CACTCTGCCG CCTCCATCGC CTGCCACGTG TACGACGATT ATACGTTTTT 
ATCCATTAAA CCGGTTTACT AACGATATAT TAAAATCAAT TCTCGGTTTG 
AAATGAAAGA GAGTGGACTT AGACTTAGAG AGATAACAGA TAAAATGGCG 
ACGGGGACGG CGACGGAGAA ACCGAAGATC GTGTGGAACG AAGGAAGACA 
TAGATTCGAG ACTGATGATC ACGAAGCCTT CATAGAGTAC AAGATGAAGA 
ATGACGGTAA AGTCATGGAT CTGGTTCGAA CCTTCGTACC GCCGTCAAAA 
GCAGGACTTG GTTTAGCTTC GCATCTATGC GTCGCCGCTT TCGAACACGC 
CTCTGAACAC TCTTTCTCCA TCATCCCCAC TTGCTCCTAC GTTTCCGTAT 
ACATCTCTTC TTTCCTCAAA AAATTGAGAT GAATCAGATT CTTATGAAAA 
TATGTCGTGT TTTGCAGGAA ACGTTTCTTC ATCGAAACCC AACGTGGCAG 
CGTCTGGTTC ACTCAGAGGA TGATTCCAAG AACCTCAAGT CTAGCATCTG 
ATCAAGTCCT GCTTTAAAGC CTTTTGGTGT ATAATAAAAA CTTGAAAACA 
TTATCTTACA ATAGTAAAGC T

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7652438 [Map]; Strand: c
  - AT1G21770.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
    Distance: -150; Region: promoter
  - AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon2 (5UTR)
Flanking Genome Sequence: 15-0339-1 - 3-prime edge
```
GCAGAGTGTT TTGCTTGCTT CGTCGTGTTA TTTGGCGTGA AGTAAAGAGT 
TCAGAGAGAA AAGGAAGTCA AAACTTCAGA GAGAAAGTGG ATGGGGGACA 
CGAAGGTAGA GACAATCTCG AGGTTAGCTC AATGGAGAAT TGAAAATTTT 
GGTCCTTGTT CTTTCAAAAA GTCCGATCCT TTCAAAGTCG GAATTTGGAA 
TTGGTAAGCT
```

AT1G21770.1

Model type: Protein coding
Short Description: Acyl-CoA N-acyltransferases (NAT) superfamily protein
Computational Description: Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G77540.1); Has 425 Blast hits to 425 proteins in 193 species: Archae - 10; Bacteria - 360; Metazoa - 6; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21780.1

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21780.2

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR