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15-0357-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28340367 [Map]; Strand: w
      • AT1G75500.2 - [+] show detail - Walls Are Thin 1
        Distance: -92; Region: promoter
      • AT1G75500.1 - [+] show detail - Walls Are Thin 1
        Distance: -126; Region: promoter
    Flanking Genome Sequence: 15-0357-1 - 5-prime edge
    GTTAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TGATGTACAC ACCAAATATT GTTACTTTGG
    TCTACTGGCA GCATTCACTC CTTGATTATG ATTTTGGAAT TGGGAAATAA
    AATTTTAATT TATATTATTA TTTCTCTATT GGGTTATATC AAGTATGATA
    ATAATATAGG TTACNTTTTT GTTTTACTAT TATTACGTTC ATTATTATTT
    TGTTTACAAA GCACACACAC AACATAAATA TATTTCAGGG AAAATCGCAA
    AAGGAGAAAG AAAAACTCAA CGTATGATAG TTTTACCTAA GAAATATGAT
    TTCTTTTGAG ATATTAAAAT AAACGATTGT GTTTTCGGAT TTTCTTGGAA
    AAAAAAGACT CTTGAATTGA AAACTATCAT ACACTATTCT ACTTAGCCTT
    ATTGGAAACT ATGACCACGT AAACAAAGTC GGGTTAAACT TATAATCAAA
    CACGTTCACA TGCACTTACC GTTACCAAAA CGAGATAATA AAGTGACAAC
    GTCTCACTAA GTCACAACTT CACAAACATT TTGTGGATGT TGGTACATCT
    CATATGTTTT AAAATCAAAA TTTGAAGACA TTCCCAAAAT TTTGGACACT
    ATATTTAACA TTNATCATCA GCTTTTGTTT CCCAACATGA TCCATGGNTA
    GGTNATTATA TGCTTTCAAA ACAACCAACC TTTTCATTTA TTGATTTCTA
    AAAGAAAAAA CNACTATGAN GCTGTTGGTT AAATCAAATC GATTAAACAA
    NGGGCCCNNA ATTTTT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28340385 [Map]; Strand: w
      • AT1G75500.2 - [+] show detail - Walls Are Thin 1
        Distance: -110; Region: promoter
      • AT1G75500.1 - [+] show detail - Walls Are Thin 1
        Distance: -144; Region: promoter
    Flanking Genome Sequence: 15-0357-1 - 3-prime edge
    TTACACAGAC NTTGACAAAN GAAACGGTNG NNGTATTTTA CCGACCGTTA 
    CCGACCGTTT TCATCCCTCT CAAATGATAG GAAACAACAA AAACTCATTA
    ATATACCTAA ATCCATATAT ATATATATAT ATATATATNN CAATATNNCA
    CANTGNTATA ANNGGGTNNA ATANANNCCA TATTANANAT CTCNGTGGGG
    GGGCCCCCAC ACNCANAGNG GGGAGAGAGA GNGCTNTNTA CNTATATATA
    TATCNCCGCA NCTTCNCTCT TTNTCTCNNT NCACACACAC ACACACACAC
    ACACACANTC TTTTTNCTTN GGAGAGNGAG TGNNNNGCNC NNNNCNGGGG
    GGGANCACNC NGATNNTNAG ANANNCNTNG GGGGAGNNCG AGANANNCTN
    CCNGCGNGGG NCGNNNNNCN CGCGCGCTNT ATA

AT1G75500.1

Model type
Protein coding
Short Description
Walls Are Thin 1
Curator Summary
An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3).
Computational Description
Walls Are Thin 1 (WAT1); INVOLVED IN: positive regulation of auxin metabolic process, positive regulation of tryptophan metabolic process, secondary cell wall biogenesis, unidimensional cell growth; LOCATED IN: plant-type vacuole membrane, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G53210.1); Has 4164 Blast hits to 4147 proteins in 615 species: Archae - 25; Bacteria - 1869; Metazoa - 6; Fungi - 0; Plants - 1248; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G75500.2

Model type
Protein coding
Short Description
Walls Are Thin 1
Curator Summary
An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3).
Computational Description
Walls Are Thin 1 (WAT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G53210.1).
Link
InterPro Scan - TAIR