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15-0361-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5237958 [Map]; Strand: c
      • AT1G15215.2 - [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding tra...
        Distance: -107; Region: promoter
      • AT1G15215.3 - [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding tra...
        Distance: -107; Region: promoter
      • AT1G15215.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding tra...
        Distance: -144; Region: promoter
    Flanking Genome Sequence: 15-0361-1 - 5-prime edge 
    GTGCCTTCAG AGTTCAGTGA GCTTTAGTGG GTTAATGGGC CTAAAATGGA 
    TAATAATAAT ATAAATGGGC TTAAACTCAC TAATTTATTA CCCATATGCT 
    TGTTTTTTGG ACCGTCTATT ATTTTATTTT AACCACACTC ATATAACNTG 
    TACTATTATT TAATATTTAT AAATGACTTT GAAACAATCG AGACAGGATG 
    AGGGAACCCG TCCGCGGGGA ATCTTCCAAG TCATATGAGC TGGTGGTGCG 
    TGGTGGAGTG TTTATTAATA TTCATGATTA CTGACATTAT TAATCAAATA 
    CTATCATAGC ATGTATAAGT ATATAATTTA ATCACAGCTA ATCCTCACTA 
    AGGCTCTACC TTCTTTTGTT GGCGACAATC CAGGCCCTTA TTTCTCCAAT 
    ACAAGATTCG TTACTAAACA TATCGAATAT ACATTATTGT AATTAGTTAG 
    TTAATTACAC GTGCTTTAAA GCATTTTAAA CGCACAAATT TGAAAATGAT 
    GGCAAAGGCC CTGATTGATT TTGACCGAGA CACAAACACG CAAACATAGA 
    AAATTTAATC AGGGATTTGT ACTCGGTTAC ATAGCTGTCA TTCTGTGTTA 
    CGTATTAATT ACGGTATTTA ACTAATCACG CACGCAGTAN ATATACTATA 
    ACTTTACTTG ATTAACAAAG CTAATAGCAT CCATAAATTG GGGTCAAGAT 
    GTTTGAACTC ATAACGAGTT ACTTTGACAT TNGNANATTG NGGGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5238080 [Map]; Strand: c
      • AT1G15215.2 - [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding tra...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G15215.3 - [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding tra...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G15215.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding tra...
        Distance: -22; Region: promoter
    Flanking Genome Sequence: 15-0361-1 - 3-prime edge 
    ATCAGTGTAG TAGCAAATTA GCTCAAGATC CTTTTCACTT CTTCTTCTTC 
    TTCCTTGTGC GCTCGATAAT GGCTGCTTCC GATGATTCCT CTCACTATTT 
    CACCGAGTTT ACCTTGTCTG AGGTTATCTA TGCTTTCTAT CATTCGTTTT 
    CTTAGATTAG AGATTCATGC TTTGTGATCT TATTGCTCTT CTTATTCGAA 
    GATTGTAGAC ATGGAGAATC TGTATAAGGA GCTCGGTGAC CAATCTCTCC 
    ACAAAGATTT CTGTCAAACT GTTGCCTCTA CTTTTAGGTA CTTTATTCTG 
    AATTTTACGA GAATTTGATC ATGTGAATGT GTTTGTTAGA GAATCGAGAC 
    ACAAGCATTT TGTGGATTTA TAGGAATAGT AGGATTATTG ATTTTCATGC 
    ACAGTATCTA AAAAATCTTT ATGTCTTCTT CCATTTTCTC TTAAAGTTGT 
    TCTGTGAATC GGAATGGCAA ATCCTCTATA ACCTGGAAAC AGGTGCGTCT 
    CTTTTTTCTT CATANAGCTA ACTGGTAAAA ATGCAATAGA GTANAAATAA 
    CTTTTTATTT TGAATCAAAA TGTTTTCAGG TCANANTTGG GNTCCNGGAG 
    AAGCTGAAGC NTNAAAGCCC ACCAAAANCC AAAACTTNNN CNT

AT1G15215.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15215.2

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15215.3

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR