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15-0394-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7994627 [Map]; Strand: c
      • AT1G22610.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0394-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAGTGG 
    AACGAGAAGT TGGTTTTTAA CGTCGGTGAC TTGAAGCGTT TGAATAACAA 
    GACTGTCGAC GTCACTGTTT ACGATGACCG CCGTGATAAT CAGCCTGGGA 
    AGTTTCTCGG CCGTGTTAAA ATTGCCGGTG CGGTTGTTCC GTTATCGGAA 
    TCTGAATCCG GTGTTCAGAG ATATCCTCTT GATAAACGAG GTTTGTTTTC 
    TAACATTAAA GGTGATATCG CTTTGAGAAT CTACGCCGCT CCTATCGACG 
    GCGGCGATTT CGTCTCTCCT CCGCCGGATT TTGCTGAGAA AGTGATGAAA 
    GAAGATAAGA GATTCGAATC TCAGGAGTTT CAATTTCAAA ATCANAATCA 
    NAATCANAAT CACTACNANC AGNTTGAAGA TGAGATTAAT AACATGGAGA 
    CNTTGAANCC NNCNNNNAAN ANANANAAAG ANTNNANAAC TTTTNNCTCN 
    NTNNGNGCTC CNCCCNNNGA NGAGGAGGAG NTNCNNC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7662634 [Map]; Strand: w
      • AT1G21830.1 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF7...
        Distance: -26; Region: promoter
    Flanking Genome Sequence: 15-0394-1 - 5-prime edge 
    GGAGAGAGGG AGATATATAA GATATGTAAC AAAGAGATGG GCTTAGGTCT 
    GAAATAGAAG CT

AT1G21830.1

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22610.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 9288 Blast hits to 5214 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 6273; Fungi - 392; Plants - 2016; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink).
Link
InterPro Scan - TAIR