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15-0396-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8911797 [Map]; Strand: w
      • AT1G25400.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT1G25400.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0396-1 - 5-prime edge 
    GTTTCTTCTC TGCCGCTAAT AAAACCGCCG GTGACAATAA CGAGAATGAG 
    CTGCATTTGC TGAAAAAAGC CACCGGACTT CCTTCTCCGT TGAAATCAAG 
    ATTGTCCCAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8911673 [Map]; Strand: w
      • AT1G25400.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT1G25400.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-0396-1 - 3-prime edge 
    GATCCGACGG CTTGGAAGTG AGTGCGTGGG ATGCACGCGT TGGTTTTGGG 
    GTGCCGGCGT TGCTCGCGGA ATGGAAGCAG CCGGGGAGGT TACTCGGGAA 
    GATCATTAGG GTTGACAGTC GGTGACGTGG ACAAGATCTA CGTCGGTGAT 
    GACGTCGGCG GGGAGATTTC TGTGGGAGAC ATGAGGATGG TTAACGGTGC 
    GTTGACGGAA CTGACGGAAT CAGAGGTTGA GAGAATGGTG AGAAGACGCN 
    GATNCCCNCA TTGAGGCTAA CCNNCGCCNC NGGGGGGAGG NNTTNTTTTT 
    TTTTNAAAAA AAAAAAAAAA AAAAATTTTT TTTTTTTTTT TTTTCCCCNN 
    AAAANNNAAC CCCTNNTNTN AAAANATTNC NNNAAANANN TTTTTTTNNN 
    AAAAAAAAAA AAANNNNCNN NNNTTNNNTN GGGNNNAAAN TTTNNNTTTT 
    TTTTNANCCC CCCCCCCNNN NNNNTTTTTT TNTTNTNNNA T

AT1G25400.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25400.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1).
Link
InterPro Scan - TAIR