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Mutant Lines
15-0422-1

15-0422-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 2875914 [Map]; Strand: c
- AT1G08930.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron12 (CDS)
- AT1G08930.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron12 (CDS)

CTGTTGCCAG CATTGCTTTT GGAACCTAAA CATAGTCAAA TAAATTTTTT 
CAATTTTCAT ATTGGAATTT CTTTAGTGAT TTAAAGTATA TTTTTCTTCT 
TATTATTGAA AATTTACCAT AATTGTGGCT ATTACGGATG TGCCAATAGC 
ACTTGGAAAT CCTGAAAATA AAAAATTATA AGTTAAATTT TTTAAATGGA 
TTGAACTCAA AATATTTATT GGATTGAACT GAAAGATGAA ATATTCATAT 
TATCAATTAA AATACCTCCT TTGTTGAAGA GGCTACTAGC ATAATAGGTA 
ACACCGGAGC TCCCACACAA TTGTTGCAAA AACATTAAAC CAACTCCGAT 
CTGAATACAA ATATATATGT AAGAATTATT TAAAATGTTT TCATGTTTAA 
AAACTAATTC GAAAGCAATT GAACAATCAT ATTTGTTTTA ACACAACCGC 
TATTCAATAT AATTGTTTGC ATTAGTTCAA AATACTTACA ATTAACGGAT 
ATGCGTATCG TCTCTGAAAC AATTCANACA TCTTAGTTTC ACCACCGTTT 
TCTGTCATGT CAATGGTATC CTGAAAAAAA AAAAAANTCA ATTTTTTCAA 
AAAAAAAACA TTNANNTTTN GAAACCCCAC CTTTNGTAAN TATTGGNTGG 
AATTTTTTAA ANGGANCCCT AATTTTGGCA TNCCCAAATG GGGGNNGCTN 
CCAAAAAANT TCNCCNTNAA ATCCCTAAGG NGTNGCANAG

3 prime edge [+] show sequence

Chromosome: 1; Position: 2876030 [Map]; Strand: c
- AT1G08930.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron13 (CDS)
- AT1G08930.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron13 (CDS)

GGCAACAGTC CTAGTCGATA AAATGGGGAG GAGAACGCTC CTAATGGTTA 
GATTATAATA TTTTTATTCA ATCAATTGTA TTATTAGTTA TGACTTTCTT 
CATGAGACTA AAGACAAGCT AATTTTTATA TAAATTTAAA CAGGCNTTCT 
TGTTCTGCAA TGGGTTTGAG TGCTTTGCTC TTAAGTGTTT CTTACGGTTT 
CCAGGTAATT TTAATTCTAC ATGTACACAT GCGTACGTAT ATTGAAACAG 
GATTTAATGT GAATAAAATT TCTTAACAAC ATTGTTAATA TAAATATGT

AT1G08930.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Curator Summary: encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.
Computational Description: EARLY RESPONSE TO DEHYDRATION 6 (ERD6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sugar transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to chitin, response to abscisic acid stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: ERD (early response to dehydration) six-like 1 (TAIR:AT1G08920.1); Has 27777 Blast hits to 27182 proteins in 2058 species: Archae - 500; Bacteria - 11725; Metazoa - 4936; Fungi - 6599; Plants - 2746; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08930.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Curator Summary: encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.
Computational Description: EARLY RESPONSE TO DEHYDRATION 6 (ERD6); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sugar transmembrane transporter activity; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to chitin, response to abscisic acid stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: ERD (early response to dehydration) six-like 1 (TAIR:AT1G08920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR