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15-0426-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22066791 [Map]; Strand: c
      • AT1G59940.1 - [+] show detail - response regulator 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0426-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    AGAACATGGA CTTGATCAGA ATCTAGCGGT GGAGATTCTA GTTCTCCGAT 
    TCCTATTCCG ATCATCTCCG ACCTTCGTAG ACAAGAAACG CCACCGTCTT 
    TGGCCATAGT GAGAAAAGAG TAGGAAATGA AAAGATAGAA GAGAGATATT 
    GCTACTAGTT CCTCTCTACT TTGTTTTATA TTTTCGTTGT TATACTCTTC 
    TATATCAAAT CTTTTTATAG GTGGATCATT TTCTACTTCA TTTCTTTTAC 
    AAAATATTTT CTTATTCCAA GTGACGATTA ATGACACAAA ACGGTACGTA 
    CCTTTTTTTT TTTTNGGGGG GGGGGGCCCN AAAAANNNNC AANCTNTTNN 
    NANNGGGNAA AAAAAAAAAA TTNCAANNTN NNNNAAAAAA NTNAAAAAAA 
    ANGCCCNGGT TTNNNTTTTT TTNCNTTTNG GGNGGGGCCC AAAAAAAANN 
    NCCGGGGNTC CCCNCCCNNC CCCNNANNNG GGGGGGNGGG GTTTTTTTTT 
    CCCGNNTTAA NGGNAAAAAN CCCNTTTTTN GTTNCNNNNA NNNCNNNNCC 
    TTTGGGGGGG GGGGGGGGGG NAAAAANNCC TTTTNTTTTN TNAAAAAAAG 
    NANNNNNNTN NCCCCCCCNN TTTNNGGGGG GCCCNTGGNC CNTTTTTGAA 
    AAAAAAANTN NGGGCNNNNN TNNGNTNGGN CCCCCNTTNN AAAANCNCCC 
    NTTTNCCCCN NNTNNAANTT NGGGNCCCCC CCCCCCCCCN NNNNNNAAAN 
    GGGGNTTNNA NA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22066716 [Map]; Strand: c
      • AT1G59940.1 - [+] show detail - response regulator 3
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-0426-1 - 5-prime edge 
    GCCGTTGATG ACAGCCTAGT TGATCGAATC GTCATCGAAA GATTGCTTCG 
    AATCACCTCC TGCAAAGGTT TCTTAACTAG TAATTCTTCC TCTTTCCCCT 
    TTAACATTTT AAAAGCCTTA TTCTCCGGTG ATGATTCAAT GCAGTCACGG 
    CGGTTGATAG CGGTTGGCGT GCTCTTGAAT T

AT1G59940.1

Model type
Protein coding
Short Description
response regulator 3
Curator Summary
Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.
Computational Description
response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink).
Link
InterPro Scan - TAIR