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15-0434-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1380409 [Map]; Strand: c
      • AT5G04770.1 - [+] show detail - cationic amino acid transporter 6
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-0434-1 - 5-prime edge 
    CTNTGGACCG NCCGATGACA CACATGTAGC GAGCCTGACC TAACATTGCC 
    ACCAAAAGTG ATGTTAATAT CCCAAAGCT

AT5G04770.1

Model type
Protein coding
Short Description
cationic amino acid transporter 6
Curator Summary
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.
Computational Description
cationic amino acid transporter 6 (CAT6); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 7 (TAIR:AT3G10600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR