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15-0437-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15380905 [Map]; Strand: w
      • AT4G31790.2 - [+] show detail - Tetrapyrrole (Corrin/Porphyrin) Methylases
        Distance: 2032; Region: intergenic
      • AT4G31800.1 - [+] show detail - WRKY DNA-binding protein 18
        Distance: -2296; Region: intergenic
    Flanking Genome Sequence: 15-0437-1 - 5-prime edge 
    ACTGTAAAAA ATTTCGTTTC TAATAACATA AATACCTAGT ATAGTGTAAT 
    GGTGTTCAGA GTTAGCATGC AAACTTGTGT TAGGAAAGGA TATCAAAAGT 
    CTCTTGTTTC AACAATTTTT ATTTTATATT CAAAAATTAT TATGATTTGA 
    TCTTTCAAGT TGATTCAATT CATGAAGATC ACATAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15380789 [Map]; Strand: w
      • AT4G31790.2 - [+] show detail - Tetrapyrrole (Corrin/Porphyrin) Methylases
        Distance: 1916; Region: intergenic
      • AT4G31800.1 - [+] show detail - WRKY DNA-binding protein 18
        Distance: -2412; Region: intergenic
    Flanking Genome Sequence: 15-0437-1 - 3-prime edge 
    TTTACAGTGT ACTAAATATA AGAACCTTTT TTGACAAAAC AAATTCAATT 
    TAGATTGCAA AACCCACATG TTTCCACTTG GTTCGAGTTT AGTAGCAAAC 
    TCTTGCTAAA AGAGGTCGAG ATACATTGTG AAAACGAACG AACGAACAAT 
    CGTTCTAATT GTGGAAGGAA TTTTGAGAGA TTTGGATGCT GGGAACTACA 
    CTATTTCGGA AAGCTCACTT TGTACCCCCT TTTTGTTTCC GAAAACCATT 
    AAAATTTGCG AAACAATCAA GATTAATCTA TGTGATATGT ATATTAATAA 
    ACTAGATTCC CTACTACGTA AAACGTCTGT AATAGGAATG GAAAATTAGT 
    AATGGGGATT CATAAGTGGA ATGATCTGTT CCCCGATGTA GACCAAATAG 
    AAATTTCTCA TCACTAGAAG TTTGATATTG AAATTTGGAC CAAACTTCTT 
    TATCTTTTTA CGCCACATTA ATCCTATACG TAAAGTGATA TAGATCGATG 
    ACAGTTGACG AACAATAAAG ATATATTGGT CAAGTTGGAT AATGTTAACA 
    AGAGATGAAT AACAATAATA TAATTAGTGA AGAAATGAGT GATGGCTCNT 
    GGAACATCTT NNAAATCACT TGTATCNTGG NTNGAAANNT ANNAAAGGAC 
    CAGCNCTGGC NGATTNNNNC TNTGGNGNNN NATAAGTNTT ATCATAAGAC 
    CTTATAAGAA AGACGACCAA AGATCTTNTT AGTCGNNGGG AAAAC

AT4G31790.2

Model type
Protein coding
Short Description
Tetrapyrrole (Corrin/Porphyrin) Methylases
Computational Description
Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G31800.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 18
Curator Summary
Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.
Computational Description
WRKY DNA-binding protein 18 (WRKY18); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 60 (TAIR:AT2G25000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR