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15-0446-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6303825 [Map]; Strand: w
      • AT1G18310.1 - [+] show detail - glycosyl hydrolase family 81 protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G18320.1 - [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 fam...
        Distance: -535; Region: promoter
    Flanking Genome Sequence: 15-0446-1 - 3-prime edge 
    CAGACCTCCT CTCAAACCCT CTCCCTACAA ATTCTTTCTT CCAAAACTTC 
    ACTCTTAAAA ACGGTGACCA AGCTGAATAT TTTCATCCTT ACCTCATCAA 
    ATCTGTGGAC TCCTCTCTCT GTATCTCATA CCCATCTCTG TTTCACAACT 
    CTGATTTCTT CTACGAGGTG TTTACCGCAG ACATCATCAT TTCCGGGTCA 
    AACGGACCCG GACCGCGTTC CCGGAAAACT CATATTATCT CTTCGTTCAG 
    TGATCTTGGC GTTACTCTTG ATTTCCCTTC CTCTAATCTC AGATTTTTCC 
    TCGTTAGAGG AAGCCCGTTT ATAACTTCTC TGTCTCCGGT AACTCCATCA 
    CTATCTCAAC GAGCCATGGG GTCAGATC

AT1G18310.1

Model type
Protein coding
Short Description
glycosyl hydrolase family 81 protein
Computational Description
glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: cell wall macromolecule catabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT5G15870.1); Has 441 Blast hits to 435 proteins in 142 species: Archae - 0; Bacteria - 86; Metazoa - 4; Fungi - 179; Plants - 58; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G18320.1

Model type
Protein coding
Short Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Computational Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT3G10110.1); Has 671 Blast hits to 671 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 229; Plants - 123; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR