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Mutant Lines
15-0447-1

15-0447-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 37258 [Map]; Strand: c
- AT1G01060.3 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron2 (5UTR)
- AT1G01060.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron2 (5UTR)
- AT1G01060.2 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT1G01060.4 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron2 (5UTR)
- AT1G01060.5 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron1 (5UTR)

CTGCTGGAGA AGCAGCGACT GTTTCACGGT GGACTTTGAA AAGATTTCTC 
TTTTGAATTT CGCTCATCAC TCTTATCTTA GTGTTTGTGG ATAAATATTT 
CTCATAAAGT ACTTTTCTCC TTTGCAGTTT CTCTAGAATC TAAAGAGGTT 
ATCACAACGG CTTTGCAATT TGAAAACTTT CATGTTTGGG GAGATCAAAG 
ATGGTTTCTT TNGTATACTT TACTTGNTAG AGAGGATNNG AAGCANCGAA 
TAGAANCACC GGTCNTGTTA TGGATACTAA GCAGCTGGAG AANAATGTAT 
NACCATACGG TACGANAAAT AAAAAAAANG NGACCGGCNN CCNCAAAAAA 
AAAAAANAGN TNGAAAAANA TTTGGGGNNG NGAAANNNNC NCCTCCTTNG 
GAGANAAAAA ATTTGGGNAC NNNNTTGTGN GNTNAAAAGN NNNNGTTGNA 
NCNNCATTTT NCNCCCCCCC NNNNNNAAAA NAAANAGGGG GNNCNCCCCC 
CGNGNGGAGA AAAANCNNCC CCCCCGNGGG GAAAANACNC CCNAAANGGN 
CACCCCNNCC NNANAAAAAA AAANNNNNNN CTNNNNNNGG GGGNATNTCT 
TTNNAAAGGG GNGGGGGTNA AAAAANCCNG GGGGGGGGNN CCCNCCCCCC 
CCNNCCCNNN NNNNGGNNAN NGNNNGGGGG NGGGGNNCCC

AT1G01060.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2469 Blast hits to 2022 proteins in 280 species: Archae - 2; Bacteria - 257; Metazoa - 292; Fungi - 162; Plants - 1048; Viruses - 29; Other Eukaryotes - 679 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.2

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2469 Blast hits to 2022 proteins in 280 species: Archae - 2; Bacteria - 257; Metazoa - 292; Fungi - 162; Plants - 1048; Viruses - 29; Other Eukaryotes - 679 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.3

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.4

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2567 Blast hits to 2041 proteins in 275 species: Archae - 2; Bacteria - 252; Metazoa - 294; Fungi - 166; Plants - 1044; Viruses - 30; Other Eukaryotes - 779 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01060.5

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Curator Summary: LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
Computational Description: LATE ELONGATED HYPOCOTYL (LHY); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1).
Link: InterPro Scan - TAIR