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15-0495-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 222523 [Map]; Strand: c
      • AT4G00490.1 - [+] show detail - beta-amylase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0495-1 - 5-prime edge 
    CTCTCTGCTC TCAGTTTCAC CTTCGCGAGA ACCAAAGGCC TAGCACCGGA 
    AAATGTAGAA ACACCACGCC AATCTCCAAC GCTGAACGGT AACAGAGCTC 
    CGAGCCGATA CTCTCGTCGG AGCTCCAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 222639 [Map]; Strand: c
      • AT4G00490.1 - [+] show detail - beta-amylase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0495-1 - 3-prime edge 
    GCAGAGAGTA CTGAGGAAGA TCGAGTTCCA ATTGATGACG ACGACGATTC 
    TACTGATCAG CTCGTAAGTG TGGAATTTCA TTTGGATGAT TCACTCGTTT 
    GTGACCAGAA TCAATTTTAC TCTTCGTTTT GTTAGGTTGA TGAAGAAATT 
    GTGCATTTCG AAGAGCGTGA TTTTGCNTGG CACAGCNGTG TGTTCCTGTA 
    TATGTTATGC TACCAGTGAG TCTTCTTTTG ATTTTATTTT TGTTGGCTAG 
    AGATTTGTGT GTGTGTTTGG TTGATTTGGC TGTTGAATGA TGTAGCTGGG 
    AGTGATTGAT ATGAACTCGG AAGTGGTGGA ACCGGAGGAG CTTTTGGATC 
    AGTTAAGAAC TTTAAAGTCG GTTAATGTTG ATGGTGTTAT GGTTGACTGC 
    TGGTGGGGAA TTGTTGAGTC ACATACACCA CAGGTTTATA ACTGGAGTGG 
    TTACAAGAAA CTTTTTCAGA TGATTCGTGA GCTTGGACTT AAGATTCAGG 
    TAATGTTATT TGATCGATGA GTCTCAGTTC AGTTTAGTGA AAGATATGCA 
    GAGTTGAGGA TGAACCTTTT TAAAGTGTTC TTGACTTGAA TTGACTTCAG 
    GTTGNTATGT CCGTTTCACG AATGTGGAGG CAATGTTGGA GATGATGTGC 
    ATATACAAAT CCCTGAGTGG GTGAGAGAAA TTGGTCAAAN CAATCCTGAC 
    ATCTACTTCA CTGACAGTGC TGGCAGGCCG TAACACTGAT GCCTTACTTG 
    GGGAATTGAC AACAACCTGT TTAAN

AT4G00490.1

Model type
Protein coding
Short Description
beta-amylase 2
Curator Summary
Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.
Computational Description
beta-amylase 2 (BAM2); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 836 Blast hits to 835 proteins in 165 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR