Home
Mutant Lines
15-0500-1

15-0500-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 10919707 [Map]; Strand: w
  - AT4G20220.1 - [+] show detail - Reverse transcriptase (RNA-dependent DNA polymerase)
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 15-0500-1 - 5-prime edge
```
AATACACATA TACACACACT GTCCAAATCC ATCATGTGAA ACAATTATTG 
AAAAATATCA AATGCCTGCC ATGTGAGTCG AAAAGGCTAG GAAAATCTAT 
TACTGATCAA GAAATCAATA GAAAAAGACC TTCTCAACAT TTGATA
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 10919219 [Map]; Strand: w
- AT4G20210.1 - [+] show detail - Terpenoid cyclases/Protein prenyltransferases superfamily protein
  Distance: -937; Region: promoter
- AT4G20220.1 - [+] show detail - Reverse transcriptase (RNA-dependent DNA polymerase)
  Distance: 0; Region: intron1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
TNGATATCTC ATATCTATTT ACATATGATA GCTTTGTTTG CTGCCAAAGT 
TGTTTTCTAG ACACGTTTAA TCTGCAGATC TCTTTTGAGA ATTTATATAT 
TTTTATTTTC TAAATTTTAT TGTATACATA ACNTTTACTT GGTTTACTCG 
CTCGATGTGC TCTCAGCATC ACCTCCATTG TTGGCATTGA CATAATTTTG 
TTACCTTGTG TGAGAATTTT TGATATATAT AATTTTGAAC TTCAAGTGCC 
GTTTTAAAAC CGTCTCCAAA AGTTCCTTAC CCAATTTACT CAGAAATATG 
CTAGTAACTT CCATTGCATG TATAATATCT AATGTTACAT ATTTAACATC 
TCGTTGTCGA TAATGATTGA TCTTTGGATA GTTAAACTGA CCAGCAAATG 
GAGTATCACT ACTAAAGCGT TTCGCGTTAT CCATGTTTAA CCTTGTAAGA 
ACATTCTTCA CATATTTCTC TTGTGACAGC ATGAGACCCT TTTTGCTTCT 
TCTAATTGTC ATGCCAACAA CCAGCTTTGC TTCGCTCACA TTTTCCATGG 
CAAACGCTTC TGGGAGTTTC ATTTTCAACT TTTTAGTTTT ATGCAAATTA 
ATTTGCTCCC TCTAAGCGGT CTTTAATACC ATGCCAAATT TAATCTGAAC 
GATAAAATAT CAAAATTAAC CTACATGAAC TACCTGACGT TAGCAATAAG 
CT

AT4G20210.1

Model type: Protein coding
Short Description: Terpenoid cyclases/Protein prenyltransferases superfamily protein
Computational Description: Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 1635 Blast hits to 1609 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1631; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20220.1

Model type: Protein coding
Short Description: Reverse transcriptase (RNA-dependent DNA polymerase)
Computational Description: Reverse transcriptase (RNA-dependent DNA polymerase); CONTAINS InterPro DOMAIN/s: Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103); Has 55 Blast hits to 55 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR