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15-0517-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22881184 [Map]; Strand: w
      • AT3G61820.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G61825.1 - [+] show detail - pre-tRNA
        Distance: -623; Region: promoter
    Flanking Genome Sequence: 15-0517-1 - 3-prime edge 
    TTACCAGCCT CGCCGCCGTA TCAACCGGAC GAAATGCTAC GAAAAGAACT 
    CCACGTACCG CCGGTGGATT TAGCGGCGCA GTTATCTCTG GCCTCTCACA 
    AGGAAGCGGA GAGTATTTTA TGAGGTTAGG TGTTGGAACT CCGGCGACTA 
    ACGTTTACAT GGTGCTCGAC ACAGGAAGCG ACGTCGTTTG GCTCCAATGC 
    TCTCCTTGCA AAGCCTGTTA CAACCAGACC GACGCCATTT TTGACCCGAA 
    GAAATCCAAA ACTTTCGCCA CCGTACCATG TGGATCTCGC CTTTGCCGGA 
    GACTAGACGA CTCGTCGGAA TGTGTCACTC GTCGAAGCAA GACTTGTCTC 
    TACCAAGTAT CGTACGGTGA CGGATCATTC ACCGAAGGAG ATTTCTCAAC 
    TGAAACGCTG ACGTTTCATG GAGCGCGTGT TGATCACGTG CCGTTAGGAT 
    GCGGTCACGA TAACGAAGGC TTGTTCGTTG GTGCGGCTGG GCTTTTGGGC 
    TTGGGCCGTG GTGGGTTATC TTTCCCGTCG CAGACGAAAA ACCGTTATAA 
    CGGAAAATTC TCTTACTGTT TGGTTGACCG GACGAGTTCC GGTTCTTCTT 
    CTAAACCACC GTCAACAATC GTGTTTGGAA ACGCCGCCGT TCCGAAAACC 
    TCTGTTTTCA CGCCGTTACT AACGAACCCG AAACTCGACA CGTTTTATTA 
    CTTGCAGCTT CTTGGAATCA GCGTTGGTGG TTCGCGCGTT CCCGGCGTTT 
    CGGAGTCGCA GTTCAAGCT

AT3G61820.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 3770 Blast hits to 3746 proteins in 344 species: Archae - 0; Bacteria - 0; Metazoa - 956; Fungi - 705; Plants - 1946; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61825.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gln (anticodon: CTG)
Link
InterPro Scan - TAIR